STRINGSTRING
TRRAP TRRAP EWSR1 EWSR1 RPL6 RPL6 KAT5 KAT5 SLC5A1 SLC5A1 APBB1 APBB1 LOC100011600 LOC100011600 PPP1CC PPP1CC DENR DENR LOC100011600-2 LOC100011600-2 MSL2 MSL2 LOC100011600-3 LOC100011600-3 LOC100011600-4 LOC100011600-4 LOC100011600-5 LOC100011600-5 LOC100011600-6 LOC100011600-6 LOC100011600-7 LOC100011600-7 LOC100011600-8 LOC100011600-8 LOC100011600-9 LOC100011600-9 LOC100011600-10 LOC100011600-10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TRRAPTransformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family. (3796 aa)
EWSR1Uncharacterized protein. (658 aa)
RPL660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (301 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (617 aa)
SLC5A1Solute carrier family 5 member 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (663 aa)
APBB1Amyloid beta precursor protein binding family B member 1. (711 aa)
LOC100011600Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PPP1CCSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (318 aa)
DENRDensity-regulated protein; Belongs to the DENR family. (198 aa)
LOC100011600-2Histone H4. (103 aa)
MSL2MSL complex subunit 2. (525 aa)
LOC100011600-3Histone H4. (103 aa)
LOC100011600-4Histone H4. (103 aa)
LOC100011600-5Histone H4. (103 aa)
LOC100011600-6Histone H4. (103 aa)
LOC100011600-7Histone H4. (103 aa)
LOC100011600-8Histone H4. (103 aa)
LOC100011600-9Histone H4. (103 aa)
LOC100011600-10Histone H4. (103 aa)
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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