7 items (Monodelphis domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BCL2	BCL2 apoptosis regulator. (188 aa)
	FOXO1	Forkhead box O1. (670 aa)
	LOC100026811	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
	LOC654275	Caspase-3-like protein 2; Belongs to the peptidase C14A family. (276 aa)
	STAT3	Signal transducer and activator of transcription. (805 aa)
	CYCS	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (105 aa)
	CASP3	Caspase-3-like protein 1; Belongs to the peptidase C14A family. (276 aa)

Your Current Organism:

Monodelphis domestica

NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCL2	CASP3	ENSMODP00000006458	ENSMODP00000005560	BCL2 apoptosis regulator.	Caspase-3-like protein 1; Belongs to the peptidase C14A family.	0.773
BCL2	CYCS	ENSMODP00000006458	ENSMODP00000058499	BCL2 apoptosis regulator.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.856
BCL2	LOC100026811	ENSMODP00000006458	ENSMODP00000041124	BCL2 apoptosis regulator.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.778
BCL2	LOC654275	ENSMODP00000006458	ENSMODP00000046868	BCL2 apoptosis regulator.	Caspase-3-like protein 2; Belongs to the peptidase C14A family.	0.841
BCL2	STAT3	ENSMODP00000006458	ENSMODP00000052576	BCL2 apoptosis regulator.	Signal transducer and activator of transcription.	0.721
CASP3	BCL2	ENSMODP00000005560	ENSMODP00000006458	Caspase-3-like protein 1; Belongs to the peptidase C14A family.	BCL2 apoptosis regulator.	0.773
CASP3	CYCS	ENSMODP00000005560	ENSMODP00000058499	Caspase-3-like protein 1; Belongs to the peptidase C14A family.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.977
CASP3	LOC100026811	ENSMODP00000005560	ENSMODP00000041124	Caspase-3-like protein 1; Belongs to the peptidase C14A family.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.961
CASP3	LOC654275	ENSMODP00000005560	ENSMODP00000046868	Caspase-3-like protein 1; Belongs to the peptidase C14A family.	Caspase-3-like protein 2; Belongs to the peptidase C14A family.	0.901
CASP3	STAT3	ENSMODP00000005560	ENSMODP00000052576	Caspase-3-like protein 1; Belongs to the peptidase C14A family.	Signal transducer and activator of transcription.	0.434
CYCS	BCL2	ENSMODP00000058499	ENSMODP00000006458	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	BCL2 apoptosis regulator.	0.856
CYCS	CASP3	ENSMODP00000058499	ENSMODP00000005560	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Caspase-3-like protein 1; Belongs to the peptidase C14A family.	0.977
CYCS	LOC100026811	ENSMODP00000058499	ENSMODP00000041124	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.901
CYCS	LOC654275	ENSMODP00000058499	ENSMODP00000046868	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Caspase-3-like protein 2; Belongs to the peptidase C14A family.	0.977
FOXO1	STAT3	ENSMODP00000012958	ENSMODP00000052576	Forkhead box O1.	Signal transducer and activator of transcription.	0.943
LOC100026811	BCL2	ENSMODP00000041124	ENSMODP00000006458	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	BCL2 apoptosis regulator.	0.778
LOC100026811	CASP3	ENSMODP00000041124	ENSMODP00000005560	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Caspase-3-like protein 1; Belongs to the peptidase C14A family.	0.961
LOC100026811	CYCS	ENSMODP00000041124	ENSMODP00000058499	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.901
LOC100026811	LOC654275	ENSMODP00000041124	ENSMODP00000046868	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	Caspase-3-like protein 2; Belongs to the peptidase C14A family.	0.961
LOC654275	BCL2	ENSMODP00000046868	ENSMODP00000006458	Caspase-3-like protein 2; Belongs to the peptidase C14A family.	BCL2 apoptosis regulator.	0.841