25 items (Penicillium roqueforti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps30b	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (62 aa)
	W6PUP2_PENRF	Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	RPS15	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	W6PYQ0_PENRF	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
	rps-17	40S ribosomal protein S17. (141 aa)
	rps23	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	rps0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (303 aa)
	rps-28	40S ribosomal protein S28. (68 aa)
	W6Q7P9_PENRF	Ribosomal protein S10. (116 aa)
	rps8b	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (201 aa)
	rps-26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
	rps-25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (96 aa)
	rps-5	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (211 aa)
	rps4a	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (265 aa)
	rps-27	40S ribosomal protein S27. (82 aa)
	rps-7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (200 aa)
	rps1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	RPS13	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rps6b	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (237 aa)
	W6QP11_PENRF	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (155 aa)
	rps-22	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	W6QPH1_PENRF	Plectin/S10, N-terminal. (156 aa)
	RPS9	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (190 aa)
	rps-29	40S ribosomal protein S29. (56 aa)
	rps19	40S ribosomal protein S19. (149 aa)

Your Current Organism:

Penicillium roqueforti

NCBI taxonomy Id: 1365484
Other names: P. roqueforti FM164, Penicillium roqueforti FM164

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPS13	RPS15	W6QGW1	W6PUZ0	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
RPS13	RPS9	W6QGW1	W6QQQ1	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.999
RPS13	W6PUP2_PENRF	W6QGW1	W6PUP2	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
RPS13	W6PYQ0_PENRF	W6QGW1	W6PYQ0	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
RPS13	W6Q7P9_PENRF	W6QGW1	W6Q7P9	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein S10.	0.999
RPS13	W6QP11_PENRF	W6QGW1	W6QP11	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	0.999
RPS13	W6QPH1_PENRF	W6QGW1	W6QPH1	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	Plectin/S10, N-terminal.	0.999
RPS13	rps-17	W6QGW1	W6Q0E2	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S17.	0.999
RPS13	rps-22	W6QGW1	W6QPG3	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.	0.999
RPS13	rps-25	W6QGW1	W6QBK7	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
RPS13	rps-26	W6QGW1	W6QAE5	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
RPS13	rps-27	W6QGW1	W6QCK4	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S27.	0.999
RPS13	rps-28	W6QGW1	W6Q445	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S28.	0.999
RPS13	rps-29	W6QGW1	W6QUL8	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S29.	0.999
RPS13	rps-5	W6QGW1	W6QBN7	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.999
RPS13	rps-7	W6QGW1	W6QCZ9	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
RPS13	rps0	W6QGW1	W6Q2F7	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
RPS13	rps1	W6QGW1	W6QES3	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
RPS13	rps19	W6QGW1	W6QW98	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S19.	0.999
RPS13	rps23	W6QGW1	W6Q287	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.999