17 items (Penicillium roqueforti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MRPL23	54S ribosomal protein L23, mitochondrial. (168 aa)
	MRPL9	54S ribosomal protein L9, mitochondrial; Belongs to the universal ribosomal protein uL3 family. (300 aa)
	W6PXJ9_PENRF	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (107 aa)
	mrpl8	60S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family. (214 aa)
	W6Q144_PENRF	Ribosomal protein L32p. (125 aa)
	W6Q424_PENRF	Ribosomal protein L4/L1e. (311 aa)
	MRPL19	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family. (153 aa)
	W6Q6Y6_PENRF	Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family. (332 aa)
	TUF1	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (440 aa)
	W6QFZ7_PENRF	Ribosomal protein L33. (60 aa)
	MRPL6	54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family. (251 aa)
	W6QHI7_PENRF	Ribosomal protein L19. (224 aa)
	W6QIE1_PENRF	Ribosomal protein L28. (216 aa)
	cyt-21	Ribosomal protein S16, mitochondrial. (104 aa)
	RML2	54S ribosomal protein RML2, mitochondrial. (406 aa)
	W6QX53_PENRF	Ribosomal protein L15, bacterial-type. (310 aa)
	MRP17	37S ribosomal protein MRP17, mitochondrial. (121 aa)

Your Current Organism:

Penicillium roqueforti

NCBI taxonomy Id: 1365484
Other names: P. roqueforti FM164, Penicillium roqueforti FM164

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MRP17	MRPL19	W6QX69	W6Q452	37S ribosomal protein MRP17, mitochondrial.	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	0.995
MRP17	MRPL23	W6QX69	W6PUZ6	37S ribosomal protein MRP17, mitochondrial.	54S ribosomal protein L23, mitochondrial.	0.997
MRP17	MRPL6	W6QX69	W6QH65	37S ribosomal protein MRP17, mitochondrial.	54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family.	0.994
MRP17	MRPL9	W6QX69	W6PUZ8	37S ribosomal protein MRP17, mitochondrial.	54S ribosomal protein L9, mitochondrial; Belongs to the universal ribosomal protein uL3 family.	0.998
MRP17	RML2	W6QX69	W6QK78	37S ribosomal protein MRP17, mitochondrial.	54S ribosomal protein RML2, mitochondrial.	0.996
MRP17	TUF1	W6QX69	W6QCE6	37S ribosomal protein MRP17, mitochondrial.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.999
MRP17	W6PXJ9_PENRF	W6QX69	W6PXJ9	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.998
MRP17	W6Q144_PENRF	W6QX69	W6Q144	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein L32p.	0.999
MRP17	W6Q424_PENRF	W6QX69	W6Q424	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein L4/L1e.	0.995
MRP17	W6Q6Y6_PENRF	W6QX69	W6Q6Y6	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.	0.997
MRP17	W6QFZ7_PENRF	W6QX69	W6QFZ7	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein L33.	0.998
MRP17	W6QHI7_PENRF	W6QX69	W6QHI7	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein L19.	0.998
MRP17	W6QIE1_PENRF	W6QX69	W6QIE1	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein L28.	0.999
MRP17	W6QX53_PENRF	W6QX69	W6QX53	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein L15, bacterial-type.	0.997
MRP17	cyt-21	W6QX69	W6QJ69	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S16, mitochondrial.	0.999
MRP17	mrpl8	W6QX69	W6Q0M6	37S ribosomal protein MRP17, mitochondrial.	60S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.	0.998
MRPL19	MRP17	W6Q452	W6QX69	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	37S ribosomal protein MRP17, mitochondrial.	0.995
MRPL19	MRPL23	W6Q452	W6PUZ6	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein L23, mitochondrial.	0.998
MRPL19	MRPL6	W6Q452	W6QH65	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family.	0.994
MRPL19	MRPL9	W6Q452	W6PUZ8	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein L9, mitochondrial; Belongs to the universal ribosomal protein uL3 family.	0.998