20 items (Penicillium roqueforti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6QNF6_PENRF	Flavin_Reduct domain-containing protein. (301 aa)
	W6QQD0_PENRF	Uncharacterized protein. (71 aa)
	W6PWB4_PENRF	Genomic scaffold, ProqFM164S01. (54 aa)
	W6QWF7_PENRF	Uncharacterized protein. (61 aa)
	W6PQR4_PENRF	Genomic scaffold, ProqFM164S01. (165 aa)
	W6Q438_PENRF	Cullin, N-terminal; Belongs to the cullin family. (873 aa)
	W6QHY5_PENRF	Genomic scaffold, ProqFM164S04. (149 aa)
	MOD-E	Heat shock protein 90 homolog. (698 aa)
	W6QM04_PENRF	CbxX/CfqX. (2329 aa)
	W6Q5F5_PENRF	RNA-dependent RNA polymerase. (560 aa)
	W6R8K4_PENRF	Uncharacterized protein. (803 aa)
	W6QF38_PENRF	Stc1 domain. (257 aa)
	W6PPX9_PENRF	Genomic scaffold, ProqFM164S01. (412 aa)
	W6Q3Y4_PENRF	Zinc finger, CCCH-type. (1924 aa)
	W6Q9Q0_PENRF	Arsenite-resistance protein 2. (888 aa)
	W6Q9C6_PENRF	Argonaute complex, subunit Arb1. (891 aa)
	W6Q5N2_PENRF	Genomic scaffold, ProqFM164S01. (1121 aa)
	W6Q3V9_PENRF	Ribonuclease CAF1. (547 aa)
	W6Q382_PENRF	Genomic scaffold, ProqFM164S02. (841 aa)
	W6QMG3_PENRF	Genomic scaffold, ProqFM164S04. (703 aa)

Your Current Organism:

Penicillium roqueforti

NCBI taxonomy Id: 1365484
Other names: P. roqueforti FM164, Penicillium roqueforti FM164

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6PPX9_PENRF	W6PQR4_PENRF	W6PPX9	W6PQR4	Genomic scaffold, ProqFM164S01.	Genomic scaffold, ProqFM164S01.	0.903
W6PPX9_PENRF	W6PWB4_PENRF	W6PPX9	W6PWB4	Genomic scaffold, ProqFM164S01.	Genomic scaffold, ProqFM164S01.	0.473
W6PPX9_PENRF	W6Q5F5_PENRF	W6PPX9	W6Q5F5	Genomic scaffold, ProqFM164S01.	RNA-dependent RNA polymerase.	0.433
W6PQR4_PENRF	W6PPX9_PENRF	W6PQR4	W6PPX9	Genomic scaffold, ProqFM164S01.	Genomic scaffold, ProqFM164S01.	0.903
W6PQR4_PENRF	W6Q5F5_PENRF	W6PQR4	W6Q5F5	Genomic scaffold, ProqFM164S01.	RNA-dependent RNA polymerase.	0.433
W6PWB4_PENRF	W6PPX9_PENRF	W6PWB4	W6PPX9	Genomic scaffold, ProqFM164S01.	Genomic scaffold, ProqFM164S01.	0.473
W6PWB4_PENRF	W6Q5F5_PENRF	W6PWB4	W6Q5F5	Genomic scaffold, ProqFM164S01.	RNA-dependent RNA polymerase.	0.433
W6Q3Y4_PENRF	W6Q5F5_PENRF	W6Q3Y4	W6Q5F5	Zinc finger, CCCH-type.	RNA-dependent RNA polymerase.	0.433
W6Q5F5_PENRF	W6PPX9_PENRF	W6Q5F5	W6PPX9	RNA-dependent RNA polymerase.	Genomic scaffold, ProqFM164S01.	0.433
W6Q5F5_PENRF	W6PQR4_PENRF	W6Q5F5	W6PQR4	RNA-dependent RNA polymerase.	Genomic scaffold, ProqFM164S01.	0.433
W6Q5F5_PENRF	W6PWB4_PENRF	W6Q5F5	W6PWB4	RNA-dependent RNA polymerase.	Genomic scaffold, ProqFM164S01.	0.433
W6Q5F5_PENRF	W6Q3Y4_PENRF	W6Q5F5	W6Q3Y4	RNA-dependent RNA polymerase.	Zinc finger, CCCH-type.	0.433
W6Q5F5_PENRF	W6Q5N2_PENRF	W6Q5F5	W6Q5N2	RNA-dependent RNA polymerase.	Genomic scaffold, ProqFM164S01.	0.433
W6Q5F5_PENRF	W6QHY5_PENRF	W6Q5F5	W6QHY5	RNA-dependent RNA polymerase.	Genomic scaffold, ProqFM164S04.	0.433
W6Q5F5_PENRF	W6QM04_PENRF	W6Q5F5	W6QM04	RNA-dependent RNA polymerase.	CbxX/CfqX.	0.433
W6Q5F5_PENRF	W6QQD0_PENRF	W6Q5F5	W6QQD0	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.433
W6Q5F5_PENRF	W6QWF7_PENRF	W6Q5F5	W6QWF7	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.433
W6Q5F5_PENRF	W6R8K4_PENRF	W6Q5F5	W6R8K4	RNA-dependent RNA polymerase.	Uncharacterized protein.	0.433
W6Q5N2_PENRF	W6Q5F5_PENRF	W6Q5N2	W6Q5F5	Genomic scaffold, ProqFM164S01.	RNA-dependent RNA polymerase.	0.433
W6QHY5_PENRF	W6Q5F5_PENRF	W6QHY5	W6Q5F5	Genomic scaffold, ProqFM164S04.	RNA-dependent RNA polymerase.	0.433