39 items (Penicillium roqueforti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6QPH6_PENRF	Ribosomal protein/NADH dehydrogenase domain. (204 aa)
	W6Q144_PENRF	Ribosomal protein L32p. (125 aa)
	W6Q2K1_PENRF	Ribosomal protein L25/L23. (226 aa)
	W6Q134_PENRF	Ribosomal protein L1. (298 aa)
	mrpl8	60S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family. (214 aa)
	W6PY34_PENRF	Phosphatidylethanolamine-binding protein PEBP. (418 aa)
	W6PXJ9_PENRF	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (107 aa)
	W6PXA0_PENRF	Ribosomal protein L28/L40, mitochondrial. (190 aa)
	W6PWS5_PENRF	Ribonuclease III, bacterial. (402 aa)
	W6PVL3_PENRF	Ribosomal protein L34. (109 aa)
	MRPL9	54S ribosomal protein L9, mitochondrial; Belongs to the universal ribosomal protein uL3 family. (300 aa)
	MRPL23	54S ribosomal protein L23, mitochondrial. (168 aa)
	mrpl38	54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family. (131 aa)
	W6PQL4_PENRF	Genomic scaffold, ProqFM164S01. (173 aa)
	W6Q3S5_PENRF	Mitochondrial homologous recombination protein 1. (332 aa)
	W6Q424_PENRF	Ribosomal protein L4/L1e. (311 aa)
	MRPL19	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family. (153 aa)
	W6Q5K0_PENRF	Ribosomal protein L5. (356 aa)
	mrpl4	54S ribosomal protein L4, mitochondrial. (233 aa)
	W6Q6Y6_PENRF	Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family. (332 aa)
	W6Q8L0_PENRF	Ribosomal protein L49/IMG2. (228 aa)
	W6QC63_PENRF	Genomic scaffold, ProqFM164S03. (300 aa)
	W6QDF8_PENRF	Genomic scaffold, ProqFM164S02. (258 aa)
	W6QNT0_PENRF	NUDIX hydrolase domain-like. (335 aa)
	W6QDP7_PENRF	Ribosomal protein L53, mitochondrial. (106 aa)
	W6QDX5_PENRF	Ribosomal protein L20, mitochondrial. (199 aa)
	W6QFZ7_PENRF	Ribosomal protein L33. (60 aa)
	MRPL6	54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family. (251 aa)
	W6QHI7_PENRF	Ribosomal protein L19. (224 aa)
	W6QIE1_PENRF	Ribosomal protein L28. (216 aa)
	W6QJJ8_PENRF	DJ-1 domain, InhA-type. (202 aa)
	RML2	54S ribosomal protein RML2, mitochondrial. (406 aa)
	W6QL16_PENRF	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (230 aa)
	MRPL33	54S ribosomal protein L33, mitochondrial. (94 aa)
	MRPL51	54S ribosomal protein L51, mitochondrial. (137 aa)
	W6R0J7_PENRF	Uncharacterized urease accessory protein ureG-like. (271 aa)
	W6QZP3_PENRF	Translation protein SH3-like. (362 aa)
	W6QX53_PENRF	Ribosomal protein L15, bacterial-type. (310 aa)
	W6QPJ7_PENRF	Uncharacterized protein. (191 aa)

Your Current Organism:

Penicillium roqueforti

NCBI taxonomy Id: 1365484
Other names: P. roqueforti FM164, Penicillium roqueforti FM164

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MRPL19	MRPL23	W6Q452	W6PUZ6	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein L23, mitochondrial.	0.998
MRPL19	MRPL33	W6Q452	W6QMJ3	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein L33, mitochondrial.	0.980
MRPL19	MRPL51	W6Q452	W6QMZ5	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein L51, mitochondrial.	0.987
MRPL19	MRPL6	W6Q452	W6QH65	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family.	0.994
MRPL19	MRPL9	W6Q452	W6PUZ8	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein L9, mitochondrial; Belongs to the universal ribosomal protein uL3 family.	0.998
MRPL19	RML2	W6Q452	W6QK78	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	54S ribosomal protein RML2, mitochondrial.	0.997
MRPL19	W6PQL4_PENRF	W6Q452	W6PQL4	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Genomic scaffold, ProqFM164S01.	0.992
MRPL19	W6PVL3_PENRF	W6Q452	W6PVL3	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L34.	0.935
MRPL19	W6PWS5_PENRF	W6Q452	W6PWS5	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribonuclease III, bacterial.	0.966
MRPL19	W6PXA0_PENRF	W6Q452	W6PXA0	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L28/L40, mitochondrial.	0.961
MRPL19	W6PXJ9_PENRF	W6Q452	W6PXJ9	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.998
MRPL19	W6PY34_PENRF	W6Q452	W6PY34	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Phosphatidylethanolamine-binding protein PEBP.	0.898
MRPL19	W6Q134_PENRF	W6Q452	W6Q134	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L1.	0.652
MRPL19	W6Q144_PENRF	W6Q452	W6Q144	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L32p.	0.993
MRPL19	W6Q2K1_PENRF	W6Q452	W6Q2K1	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L25/L23.	0.914
MRPL19	W6Q3S5_PENRF	W6Q452	W6Q3S5	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial homologous recombination protein 1.	0.634
MRPL19	W6Q424_PENRF	W6Q452	W6Q424	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L4/L1e.	0.995
MRPL19	W6Q5K0_PENRF	W6Q452	W6Q5K0	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L5.	0.995
MRPL19	W6Q6Y6_PENRF	W6Q452	W6Q6Y6	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.	0.995
MRPL19	W6Q8L0_PENRF	W6Q452	W6Q8L0	54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L49/IMG2.	0.969