23 items (Penicillium roqueforti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6R121_PENRF	RNA-binding S4 domain. (465 aa)
	W6PVF9_PENRF	Ribosomal protein S21. (229 aa)
	W6PWS4_PENRF	Ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. (300 aa)
	W6PXT2_PENRF	Ribosomal protein S12/S23. (202 aa)
	W6PY61_PENRF	Ribosomal protein S23/S29, mitochondrial. (502 aa)
	W6PYS8_PENRF	Arf GTPase activating protein. (437 aa)
	rsm25	37S ribosomal protein S25, mitochondrial. (259 aa)
	W6Q2M5_PENRF	Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (403 aa)
	W6Q9P4_PENRF	Ribosomal protein S7. (374 aa)
	W6Q9Y0_PENRF	Manganese/iron superoxide dismutase. (298 aa)
	W6QAJ1_PENRF	Ribosomal protein S2. (341 aa)
	W6QC44_PENRF	Arb2 domain. (544 aa)
	W6QE00_PENRF	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (104 aa)
	MRP2	40S ribosomal protein MRP2, mitochondrial. (120 aa)
	W6QJ10_PENRF	Ribosomal protein S18. (193 aa)
	W6QL55_PENRF	Ribosomal protein S11. (233 aa)
	W6QM33_PENRF	40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. (307 aa)
	RSM19	37S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family. (94 aa)
	W6QPQ0_PENRF	Ribosomal protein S35, mitochondrial. (388 aa)
	W6QSB4_PENRF	Ribosomal protein S24/S35, mitochondrial, conserved domain. (385 aa)
	W6QV51_PENRF	Ribosomal protein S8. (170 aa)
	MRP17	37S ribosomal protein MRP17, mitochondrial. (121 aa)
	W6R186_PENRF	Ribosomal protein S27/S33, mitochondrial. (106 aa)

Your Current Organism:

Penicillium roqueforti

NCBI taxonomy Id: 1365484
Other names: P. roqueforti FM164, Penicillium roqueforti FM164

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MRP17	MRP2	W6QX69	W6QIJ3	37S ribosomal protein MRP17, mitochondrial.	40S ribosomal protein MRP2, mitochondrial.	0.990
MRP17	RSM19	W6QX69	W6QMJ4	37S ribosomal protein MRP17, mitochondrial.	37S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family.	0.940
MRP17	W6PVF9_PENRF	W6QX69	W6PVF9	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S21.	0.946
MRP17	W6PWS4_PENRF	W6QX69	W6PWS4	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
MRP17	W6PXT2_PENRF	W6QX69	W6PXT2	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S12/S23.	0.999
MRP17	W6PY61_PENRF	W6QX69	W6PY61	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S23/S29, mitochondrial.	0.999
MRP17	W6Q2M5_PENRF	W6QX69	W6Q2M5	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
MRP17	W6Q9P4_PENRF	W6QX69	W6Q9P4	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S7.	0.996
MRP17	W6Q9Y0_PENRF	W6QX69	W6Q9Y0	37S ribosomal protein MRP17, mitochondrial.	Manganese/iron superoxide dismutase.	0.732
MRP17	W6QAJ1_PENRF	W6QX69	W6QAJ1	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S2.	0.999
MRP17	W6QC44_PENRF	W6QX69	W6QC44	37S ribosomal protein MRP17, mitochondrial.	Arb2 domain.	0.990
MRP17	W6QE00_PENRF	W6QX69	W6QE00	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	0.990
MRP17	W6QJ10_PENRF	W6QX69	W6QJ10	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S18.	0.995
MRP17	W6QL55_PENRF	W6QX69	W6QL55	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S11.	0.999
MRP17	W6QM33_PENRF	W6QX69	W6QM33	37S ribosomal protein MRP17, mitochondrial.	40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.	0.999
MRP17	W6QPQ0_PENRF	W6QX69	W6QPQ0	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S35, mitochondrial.	0.804
MRP17	W6QSB4_PENRF	W6QX69	W6QSB4	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S24/S35, mitochondrial, conserved domain.	0.999
MRP17	W6QV51_PENRF	W6QX69	W6QV51	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S8.	0.990
MRP17	W6R121_PENRF	W6QX69	W6R121	37S ribosomal protein MRP17, mitochondrial.	RNA-binding S4 domain.	0.980
MRP17	W6R186_PENRF	W6QX69	W6R186	37S ribosomal protein MRP17, mitochondrial.	Ribosomal protein S27/S33, mitochondrial.	0.956