(7 nodes) Cdc73/Paf1 complex network (Penicillium roqueforti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W6PW40_PENRF	Tetratricopeptide-like helical. (1201 aa)
	rec14	Meiotic recombination protein rec14. (309 aa)
	W6Q6T8_PENRF	RNA polymerase II accessory factor, Cdc73. (472 aa)
	W6Q6X1_PENRF	Plus-3. (522 aa)
	W6QCT6_PENRF	Genomic scaffold, ProqFM164S03. (589 aa)
	W6Q731_PENRF	Leo1-like protein. (434 aa)
	W6PUS2_PENRF	RNA polymerase II-associated, Paf1. (486 aa)

Your Current Organism:

Penicillium roqueforti

NCBI taxonomy Id: 1365484
Other names: P. roqueforti FM164, Penicillium roqueforti FM164

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W6PUS2_PENRF	W6PW40_PENRF	W6PUS2	W6PW40	RNA polymerase II-associated, Paf1.	Tetratricopeptide-like helical.	0.999
W6PUS2_PENRF	W6Q6T8_PENRF	W6PUS2	W6Q6T8	RNA polymerase II-associated, Paf1.	RNA polymerase II accessory factor, Cdc73.	0.999
W6PUS2_PENRF	W6Q6X1_PENRF	W6PUS2	W6Q6X1	RNA polymerase II-associated, Paf1.	Plus-3.	0.996
W6PUS2_PENRF	W6Q731_PENRF	W6PUS2	W6Q731	RNA polymerase II-associated, Paf1.	Leo1-like protein.	0.995
W6PUS2_PENRF	rec14	W6PUS2	W6Q219	RNA polymerase II-associated, Paf1.	Meiotic recombination protein rec14.	0.998
W6PW40_PENRF	W6PUS2_PENRF	W6PW40	W6PUS2	Tetratricopeptide-like helical.	RNA polymerase II-associated, Paf1.	0.999
W6PW40_PENRF	W6Q6T8_PENRF	W6PW40	W6Q6T8	Tetratricopeptide-like helical.	RNA polymerase II accessory factor, Cdc73.	0.999
W6PW40_PENRF	W6Q6X1_PENRF	W6PW40	W6Q6X1	Tetratricopeptide-like helical.	Plus-3.	0.996
W6PW40_PENRF	W6Q731_PENRF	W6PW40	W6Q731	Tetratricopeptide-like helical.	Leo1-like protein.	0.999
W6PW40_PENRF	W6QCT6_PENRF	W6PW40	W6QCT6	Tetratricopeptide-like helical.	Genomic scaffold, ProqFM164S03.	0.977
W6PW40_PENRF	rec14	W6PW40	W6Q219	Tetratricopeptide-like helical.	Meiotic recombination protein rec14.	0.999
W6Q6T8_PENRF	W6PUS2_PENRF	W6Q6T8	W6PUS2	RNA polymerase II accessory factor, Cdc73.	RNA polymerase II-associated, Paf1.	0.999
W6Q6T8_PENRF	W6PW40_PENRF	W6Q6T8	W6PW40	RNA polymerase II accessory factor, Cdc73.	Tetratricopeptide-like helical.	0.999
W6Q6T8_PENRF	W6Q6X1_PENRF	W6Q6T8	W6Q6X1	RNA polymerase II accessory factor, Cdc73.	Plus-3.	0.995
W6Q6T8_PENRF	W6Q731_PENRF	W6Q6T8	W6Q731	RNA polymerase II accessory factor, Cdc73.	Leo1-like protein.	0.999
W6Q6T8_PENRF	W6QCT6_PENRF	W6Q6T8	W6QCT6	RNA polymerase II accessory factor, Cdc73.	Genomic scaffold, ProqFM164S03.	0.975
W6Q6T8_PENRF	rec14	W6Q6T8	W6Q219	RNA polymerase II accessory factor, Cdc73.	Meiotic recombination protein rec14.	0.999
W6Q6X1_PENRF	W6PUS2_PENRF	W6Q6X1	W6PUS2	Plus-3.	RNA polymerase II-associated, Paf1.	0.996
W6Q6X1_PENRF	W6PW40_PENRF	W6Q6X1	W6PW40	Plus-3.	Tetratricopeptide-like helical.	0.996
W6Q6X1_PENRF	W6Q6T8_PENRF	W6Q6X1	W6Q6T8	Plus-3.	RNA polymerase II accessory factor, Cdc73.	0.995