STRINGSTRING
W6PW57_PENRF W6PW57_PENRF W6PQQ3_PENRF W6PQQ3_PENRF W6PQW1_PENRF W6PQW1_PENRF W6PR43_PENRF W6PR43_PENRF W6PRH6_PENRF W6PRH6_PENRF W6PRN8_PENRF W6PRN8_PENRF TFB2 TFB2 W6PUK6_PENRF W6PUK6_PENRF W6PUW3_PENRF W6PUW3_PENRF rbx1 rbx1 W6PVG6_PENRF W6PVG6_PENRF tfb5 tfb5 RAD26 RAD26 W6PY38_PENRF W6PY38_PENRF W6PY46_PENRF W6PY46_PENRF ssb1 ssb1 cdc17 cdc17 ercc3 ercc3 W6PZR2_PENRF W6PZR2_PENRF W6Q0B0_PENRF W6Q0B0_PENRF cwf16 cwf16 W6Q171_PENRF W6Q171_PENRF W6Q1H6_PENRF W6Q1H6_PENRF RFC3 RFC3 W6Q2C0_PENRF W6Q2C0_PENRF adl1 adl1 W6Q376_PENRF W6Q376_PENRF W6Q438_PENRF W6Q438_PENRF W6Q444_PENRF W6Q444_PENRF W6Q483_PENRF W6Q483_PENRF W6Q4B7_PENRF W6Q4B7_PENRF cyp10 cyp10 W6Q528_PENRF W6Q528_PENRF W6Q5H2_PENRF W6Q5H2_PENRF W6Q5I9_PENRF W6Q5I9_PENRF W6Q5T5_PENRF W6Q5T5_PENRF rhp14 rhp14 W6Q6Q2_PENRF W6Q6Q2_PENRF W6Q748_PENRF W6Q748_PENRF W6Q7S6_PENRF W6Q7S6_PENRF W6Q8K8_PENRF W6Q8K8_PENRF W6Q8N0_PENRF W6Q8N0_PENRF W6Q8T8_PENRF W6Q8T8_PENRF W6Q8U8_PENRF W6Q8U8_PENRF crk1 crk1 W6Q8Z8_PENRF W6Q8Z8_PENRF tfb4 tfb4 pcn1 pcn1 W6QAH8_PENRF W6QAH8_PENRF W6QAS7_PENRF W6QAS7_PENRF W6QBC3_PENRF W6QBC3_PENRF W6QBF3_PENRF W6QBF3_PENRF rad16 rad16 W6QCI2_PENRF W6QCI2_PENRF W6QCX0_PENRF W6QCX0_PENRF W6QD64_PENRF W6QD64_PENRF RAD3 RAD3 W6QDX2_PENRF W6QDX2_PENRF W6QEJ7_PENRF W6QEJ7_PENRF tfh47 tfh47 W6QFM0_PENRF W6QFM0_PENRF W6QFR9_PENRF W6QFR9_PENRF W6QG45_PENRF W6QG45_PENRF W6QGG4_PENRF W6QGG4_PENRF W6QH92_PENRF W6QH92_PENRF pol2 pol2 W6QJ23_PENRF W6QJ23_PENRF W6QJG4_PENRF W6QJG4_PENRF W6QJG9_PENRF W6QJG9_PENRF W6QJP5_PENRF W6QJP5_PENRF W6QK00_PENRF W6QK00_PENRF W6QKB8_PENRF W6QKB8_PENRF rfc4 rfc4 pol3 pol3 W6QNS6_PENRF W6QNS6_PENRF RFC2 RFC2 W6QSR6_PENRF W6QSR6_PENRF W6QTJ0_PENRF W6QTJ0_PENRF W6QU32_PENRF W6QU32_PENRF W6QVD6_PENRF W6QVD6_PENRF W6R692_PENRF W6R692_PENRF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W6PW57_PENRFUV excision repair protein Rad23. (377 aa)
W6PQQ3_PENRFProbable transposable element. (1009 aa)
W6PQW1_PENRFCdk-activating kinase assembly factor (MAT1). (369 aa)
W6PR43_PENRFProbable transposable element. (822 aa)
W6PRH6_PENRFProbable transposable element. (126 aa)
W6PRN8_PENRFProliferating cell nuclear antigen, PCNA. (586 aa)
TFB2RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (481 aa)
W6PUK6_PENRFGenomic scaffold, ProqFM164S01. (107 aa)
W6PUW3_PENRFDNA repair protein rad10. (357 aa)
rbx1RING-box protein 1. (117 aa)
W6PVG6_PENRFGenomic scaffold, ProqFM164S01. (211 aa)
tfb5RNA polymerase II transcription factor B subunit 5. (72 aa)
RAD26DNA repair and recombination protein RAD26. (1117 aa)
W6PY38_PENRFDNA polymerase alpha/epsilon, subunit B. (539 aa)
W6PY46_PENRFUncharacterized protein. (118 aa)
ssb1Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (607 aa)
cdc17DNA ligase. (861 aa)
ercc3Probable DNA repair helicase ercc3. (819 aa)
W6PZR2_PENRFDNA polymerase alpha/epsilon, subunit B. (764 aa)
W6Q0B0_PENRFProbable transposable element. (144 aa)
cwf16Cell cycle control protein cwf16. (273 aa)
W6Q171_PENRFProbable transposable element. (162 aa)
W6Q1H6_PENRFHistone-fold. (272 aa)
RFC3Replication factor C subunit 3. (393 aa)
W6Q2C0_PENRFProbable transposable element. (1829 aa)
adl1DNA ligase. (826 aa)
W6Q376_PENRFUncharacterized protein. (278 aa)
W6Q438_PENRFCullin, N-terminal; Belongs to the cullin family. (873 aa)
W6Q444_PENRFDNA polymerase delta, subunit 4. (184 aa)
W6Q483_PENRFCleavage/polyadenylation specificity factor, A subunit, C-terminal. (1143 aa)
W6Q4B7_PENRFReplication protein A, subunit RPA32. (278 aa)
cyp10Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)
W6Q528_PENRFGenomic scaffold, ProqFM164S02. (162 aa)
W6Q5H2_PENRFDNA polymerase subunit Cdc27. (434 aa)
W6Q5I9_PENRFUncharacterized protein. (279 aa)
W6Q5T5_PENRFAAA+ ATPase domain. (1178 aa)
rhp14DNA repair protein rad14. (368 aa)
W6Q6Q2_PENRFHelicase-like, DEXD box c2 type. (422 aa)
W6Q748_PENRFProbable transposable element. (453 aa)
W6Q7S6_PENRFHigh mobility group, superfamily. (308 aa)
W6Q8K8_PENRFProbable transposable element. (181 aa)
W6Q8N0_PENRFGenomic scaffold, ProqFM164S02. (76 aa)
W6Q8T8_PENRFGenomic scaffold, ProqFM164S02. (253 aa)
W6Q8U8_PENRFProbable transposable element. (135 aa)
crk1Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily. (404 aa)
W6Q8Z8_PENRFGenomic scaffold, ProqFM164S02. (192 aa)
tfb4RNA polymerase II transcription factor B subunit 4. (375 aa)
pcn1Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (219 aa)
W6QAH8_PENRFDNA repair protein (XPGC)/yeast Rad. (1126 aa)
W6QAS7_PENRFGenomic scaffold, ProqFM164S03. (146 aa)
W6QBC3_PENRFGenomic scaffold, ProqFM164S02. (65 aa)
W6QBF3_PENRFProbable transposable element. (2379 aa)
rad16DNA repair protein rad16. (972 aa)
W6QCI2_PENRFGenomic scaffold, ProqFM164S03. (396 aa)
W6QCX0_PENRFGenomic scaffold, ProqFM164S03. (530 aa)
W6QD64_PENRFDNA repair protein Rad4. (947 aa)
RAD3DNA repair helicase RAD3. (794 aa)
W6QDX2_PENRFATP-dependent helicase, C-terminal. (250 aa)
W6QEJ7_PENRFActivator of mitotic machinery Cdc14 phosphatase activation C-terminal. (884 aa)
tfh47General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (447 aa)
W6QFM0_PENRFUncharacterized protein. (194 aa)
W6QFR9_PENRFProbable transposable element. (116 aa)
W6QG45_PENRFNucleic acid-binding, OB-fold-like. (283 aa)
W6QGG4_PENRFCyclin C/H/T/L. (423 aa)
W6QH92_PENRFWD40/YVTN repeat-like-containing domain. (491 aa)
pol2DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2226 aa)
W6QJ23_PENRFProbable transposable element. (273 aa)
W6QJG4_PENRFGenomic scaffold, ProqFM164S01. (313 aa)
W6QJG9_PENRFDNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (553 aa)
W6QJP5_PENRFUncharacterized protein. (485 aa)
W6QK00_PENRFReplication factor C subunit 5. (352 aa)
W6QKB8_PENRFPutative RNA polymerase II transcription factor B subunit 1. (642 aa)
rfc4Replication factor C subunit 4. (351 aa)
pol3DNA polymerase. (1105 aa)
W6QNS6_PENRFProbable transposable element. (1745 aa)
RFC2Replication factor C subunit 2. (393 aa)
W6QSR6_PENRFReplication factor C subunit 1. (1052 aa)
W6QTJ0_PENRFProbable transposable element. (1260 aa)
W6QU32_PENRFGenomic scaffold, ProqFM164S02. (65 aa)
W6QVD6_PENRFDNA helicase, UvrD/REP type. (985 aa)
W6R692_PENRFDNA repair protein Rad4. (905 aa)
Your Current Organism:
Penicillium roqueforti
NCBI taxonomy Id: 1365484
Other names: P. roqueforti FM164, Penicillium roqueforti FM164
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