8 items (Kalmanozyma brasiliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V5EWS0_KALBG	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (487 aa)
	V5ETU6_KALBG	Uncharacterized protein. (845 aa)
	V5ESW2_KALBG	Actin; Belongs to the actin family. (801 aa)
	V5ERX7_KALBG	PAPA-1 domain-containing protein. (497 aa)
	V5EEQ4_KALBG	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (474 aa)
	V5EEF6_KALBG	YL1_C domain-containing protein. (180 aa)
	V5EWJ8_KALBG	Uncharacterized protein. (1874 aa)
	V5EYJ7_KALBG	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (1321 aa)

Your Current Organism:

Kalmanozyma brasiliensis

NCBI taxonomy Id: 1365824
Other names: K. brasiliensis GHG001, Kalmanozyma brasiliensis GHG001, Pseudozyma brasiliensis GHG001, Pseudozyma hubeiensis GHG001

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V5EEF6_KALBG	V5EEQ4_KALBG	V5EEF6	V5EEQ4	YL1_C domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.981
V5EEF6_KALBG	V5ERX7_KALBG	V5EEF6	V5ERX7	YL1_C domain-containing protein.	PAPA-1 domain-containing protein.	0.944
V5EEF6_KALBG	V5ESW2_KALBG	V5EEF6	V5ESW2	YL1_C domain-containing protein.	Actin; Belongs to the actin family.	0.997
V5EEF6_KALBG	V5ETU6_KALBG	V5EEF6	V5ETU6	YL1_C domain-containing protein.	Uncharacterized protein.	0.628
V5EEF6_KALBG	V5EWJ8_KALBG	V5EEF6	V5EWJ8	YL1_C domain-containing protein.	Uncharacterized protein.	0.915
V5EEF6_KALBG	V5EWS0_KALBG	V5EEF6	V5EWS0	YL1_C domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.993
V5EEF6_KALBG	V5EYJ7_KALBG	V5EEF6	V5EYJ7	YL1_C domain-containing protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.989
V5EEQ4_KALBG	V5EEF6_KALBG	V5EEQ4	V5EEF6	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	YL1_C domain-containing protein.	0.981
V5EEQ4_KALBG	V5ERX7_KALBG	V5EEQ4	V5ERX7	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	PAPA-1 domain-containing protein.	0.924
V5EEQ4_KALBG	V5ESW2_KALBG	V5EEQ4	V5ESW2	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Actin; Belongs to the actin family.	0.987
V5EEQ4_KALBG	V5ETU6_KALBG	V5EEQ4	V5ETU6	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.782
V5EEQ4_KALBG	V5EWJ8_KALBG	V5EEQ4	V5EWJ8	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.957
V5EEQ4_KALBG	V5EWS0_KALBG	V5EEQ4	V5EWS0	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.999
V5EEQ4_KALBG	V5EYJ7_KALBG	V5EEQ4	V5EYJ7	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.953
V5ERX7_KALBG	V5EEF6_KALBG	V5ERX7	V5EEF6	PAPA-1 domain-containing protein.	YL1_C domain-containing protein.	0.944
V5ERX7_KALBG	V5EEQ4_KALBG	V5ERX7	V5EEQ4	PAPA-1 domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.924
V5ERX7_KALBG	V5ESW2_KALBG	V5ERX7	V5ESW2	PAPA-1 domain-containing protein.	Actin; Belongs to the actin family.	0.957
V5ERX7_KALBG	V5ETU6_KALBG	V5ERX7	V5ETU6	PAPA-1 domain-containing protein.	Uncharacterized protein.	0.712
V5ERX7_KALBG	V5EWJ8_KALBG	V5ERX7	V5EWJ8	PAPA-1 domain-containing protein.	Uncharacterized protein.	0.854
V5ERX7_KALBG	V5EWS0_KALBG	V5ERX7	V5EWS0	PAPA-1 domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.968