8 items (Kalmanozyma brasiliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

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Others

textmining

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protein homology

Your Input:
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1429 aa)
	V5ELL2_KALBG	EMC1_C domain-containing protein. (1121 aa)
	V5ELQ3_KALBG	WD_REPEATS_REGION domain-containing protein. (474 aa)
	V5ERJ6_KALBG	Putative periodic tryptophan protein PWP2. (902 aa)
	V5EU56_KALBG	F-box domain-containing protein. (678 aa)
	V5F125_KALBG	Uncharacterized protein. (1103 aa)
	V5F305_KALBG	Uncharacterized protein. (1053 aa)
	V5GHV0_KALBG	Uncharacterized protein. (543 aa)

Your Current Organism:

Kalmanozyma brasiliensis

NCBI taxonomy Id: 1365824
Other names: K. brasiliensis GHG001, Kalmanozyma brasiliensis GHG001, Pseudozyma brasiliensis GHG001, Pseudozyma hubeiensis GHG001

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V5ERJ6_KALBG	V5F125_KALBG	V5ERJ6	V5F125	Putative periodic tryptophan protein PWP2.	Uncharacterized protein.	0.999
V5ERJ6_KALBG	V5F305_KALBG	V5ERJ6	V5F305	Putative periodic tryptophan protein PWP2.	Uncharacterized protein.	0.999
V5ERJ6_KALBG	V5GHV0_KALBG	V5ERJ6	V5GHV0	Putative periodic tryptophan protein PWP2.	Uncharacterized protein.	0.838
V5F125_KALBG	V5ERJ6_KALBG	V5F125	V5ERJ6	Uncharacterized protein.	Putative periodic tryptophan protein PWP2.	0.999
V5F125_KALBG	V5F305_KALBG	V5F125	V5F305	Uncharacterized protein.	Uncharacterized protein.	0.999
V5F125_KALBG	V5GHV0_KALBG	V5F125	V5GHV0	Uncharacterized protein.	Uncharacterized protein.	0.572
V5F305_KALBG	V5ERJ6_KALBG	V5F305	V5ERJ6	Uncharacterized protein.	Putative periodic tryptophan protein PWP2.	0.999
V5F305_KALBG	V5F125_KALBG	V5F305	V5F125	Uncharacterized protein.	Uncharacterized protein.	0.999
V5F305_KALBG	V5GHV0_KALBG	V5F305	V5GHV0	Uncharacterized protein.	Uncharacterized protein.	0.539
V5GHV0_KALBG	V5ERJ6_KALBG	V5GHV0	V5ERJ6	Uncharacterized protein.	Putative periodic tryptophan protein PWP2.	0.838
V5GHV0_KALBG	V5F125_KALBG	V5GHV0	V5F125	Uncharacterized protein.	Uncharacterized protein.	0.572
V5GHV0_KALBG	V5F305_KALBG	V5GHV0	V5F305	Uncharacterized protein.	Uncharacterized protein.	0.539