79 items (Kalmanozyma brasiliensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V5GMG5_KALBG	Uncharacterized protein. (178 aa)
	V5GKG3_KALBG	Uncharacterized protein. (1042 aa)
	V5GK11_KALBG	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (306 aa)
	V5EZ04_KALBG	Uncharacterized protein. (340 aa)
	V5EYI3_KALBG	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (235 aa)
	V5EXN5_KALBG	Nuclear transport factor. (205 aa)
	V5EX76_KALBG	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	V5EW41_KALBG	G domain-containing protein. (807 aa)
	V5EVY1_KALBG	FHA domain-containing protein. (527 aa)
	V5EVN1_KALBG	Putative rRNA processing protein. (203 aa)
	NAT10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1174 aa)
	V5EVE3_KALBG	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (701 aa)
	V5EVD6_KALBG	Translation elongation factor 2. (1148 aa)
	V5EV43_KALBG	Kri1_C domain-containing protein. (714 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
	V5EUI4_KALBG	Nop domain-containing protein. (541 aa)
	V5EU39_KALBG	Pseudouridine synthase. (496 aa)
	V5ETZ6_KALBG	Putative nucleic-acid-binding protein. (204 aa)
	V5ETM6_KALBG	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (712 aa)
	V5ETI3_KALBG	WD_REPEATS_REGION domain-containing protein. (1117 aa)
	V5ETH0_KALBG	Uncharacterized protein. (974 aa)
	V5ETF5_KALBG	Putative hydrolase or acyltransferase. (1829 aa)
	V5ET01_KALBG	Uncharacterized protein. (1007 aa)
	V5ESJ7_KALBG	C2H2-type domain-containing protein. (492 aa)
	V5ESC7_KALBG	Putative IMP3-component of the U3 small nucleolar ribonucleoprotein. (182 aa)
	V5ES58_KALBG	Uncharacterized protein. (115 aa)
	V5ERR9_KALBG	Ribosome biogenesis protein-Nop58p/Nop5p. (576 aa)
	V5ERJ6_KALBG	Putative periodic tryptophan protein PWP2. (902 aa)
	V5EQV7_KALBG	TruB_N domain-containing protein. (414 aa)
	V5EQH7_KALBG	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (398 aa)
	V5EPQ1_KALBG	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (213 aa)
	V5EPL4_KALBG	BP28CT domain-containing protein. (2216 aa)
	V5EPK4_KALBG	N-acetyltransferase domain-containing protein. (619 aa)
	V5EP47_KALBG	Exonuclease domain-containing protein. (670 aa)
	V5ENW2_KALBG	Uncharacterized protein. (287 aa)
	V5EMZ9_KALBG	Protein kinase; Belongs to the protein kinase superfamily. (375 aa)
	V5ELV7_KALBG	GN3L_Grn1 domain-containing protein. (650 aa)
	V5EKY8_KALBG	Spindle pole body component. (959 aa)
	V5EKY6_KALBG	Uncharacterized protein. (273 aa)
	V5EEK5_KALBG	Uncharacterized protein. (1096 aa)
	V5ECD6_KALBG	RNA 3'-terminal phosphate cyclase. (411 aa)
	V5EB83_KALBG	mRNA export factor TAP/MEX67. (530 aa)
	V5EB29_KALBG	U3 small nucleolar ribonucleoprotein. (288 aa)
	V5E9Y5_KALBG	Uncharacterized protein. (851 aa)
	V5E9M7_KALBG	Uncharacterized protein. (545 aa)
	V5E8V4_KALBG	CCHC-type domain-containing protein. (1209 aa)
	V5E8N2_KALBG	Nucleolar GTP-binding protein. (721 aa)
	V5E777_KALBG	Uncharacterized protein. (604 aa)
	V5E5E3_KALBG	Small GTPase-RAS protein. (207 aa)
	V5E461_KALBG	POPLD domain-containing protein. (718 aa)
	V5E3N8_KALBG	RNase III domain-containing protein. (495 aa)
	V5E383_KALBG	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (549 aa)
	V5E2W6_KALBG	Rieske domain-containing protein. (521 aa)
	V5GJX2_KALBG	POP4 domain-containing protein. (356 aa)
	V5EKX6_KALBG	Uncharacterized protein. (362 aa)
	V5EJI5_KALBG	Putative NOP10-nucleolar rRNA processing protein. (64 aa)
	V5EEM0_KALBG	WD_REPEATS_REGION domain-containing protein. (572 aa)
	V5GJY0_KALBG	Uncharacterized protein. (673 aa)
	V5EZ48_KALBG	Uncharacterized protein. (950 aa)
	V5EZB6_KALBG	Uncharacterized protein. (1017 aa)
	V5EZM1_KALBG	Exonuclease domain-containing protein. (216 aa)
	V5F125_KALBG	Uncharacterized protein. (1103 aa)
	V5F269_KALBG	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (212 aa)
	V5F2J5_KALBG	Cell division cycle protein. (795 aa)
	V5F305_KALBG	Uncharacterized protein. (1053 aa)
	V5GFV1_KALBG	U3 small nucleolar RNA-associated protein 22. (1240 aa)
	V5GG32_KALBG	Uncharacterized protein. (789 aa)
	V5GGN4_KALBG	Nuclear transport receptor CRM1/MSN5. (1079 aa)
	V5GJE7_KALBG	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
	V5GJT6_KALBG	Protein kinase; Belongs to the protein kinase superfamily. (342 aa)
	V5GJW1_KALBG	Uncharacterized protein. (1064 aa)
	V5GU76_KALBG	Transcription factor. (744 aa)
	V5GS24_KALBG	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5157 aa)
	V5GRR5_KALBG	RIO1 Protein kinase. (604 aa)
	V5GQU4_KALBG	Uncharacterized protein. (486 aa)
	V5GQE4_KALBG	RIO1 Protein kinase. (695 aa)
	V5GQD9_KALBG	GTP-binding protein AARP2 involved in 40S ribosome biogenesis. (1161 aa)
	V5GNV5_KALBG	WD_REPEATS_REGION domain-containing protein. (876 aa)
	V5GMT8_KALBG	Putative exosome subunit. (254 aa)

Your Current Organism:

Kalmanozyma brasiliensis

NCBI taxonomy Id: 1365824
Other names: K. brasiliensis GHG001, Kalmanozyma brasiliensis GHG001, Pseudozyma brasiliensis GHG001, Pseudozyma hubeiensis GHG001

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NAT10	V5E383_KALBG	V5EVF9	V5E383	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.	0.826
NAT10	V5E777_KALBG	V5EVF9	V5E777	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.658
NAT10	V5E8N2_KALBG	V5EVF9	V5E8N2	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Nucleolar GTP-binding protein.	0.877
NAT10	V5E9Y5_KALBG	V5EVF9	V5E9Y5	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.833
NAT10	V5EB29_KALBG	V5EVF9	V5EB29	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 small nucleolar ribonucleoprotein.	0.995
NAT10	V5ECD6_KALBG	V5EVF9	V5ECD6	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	RNA 3'-terminal phosphate cyclase.	0.973
NAT10	V5EEK5_KALBG	V5EVF9	V5EEK5	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.988
NAT10	V5EEM0_KALBG	V5EVF9	V5EEM0	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	WD_REPEATS_REGION domain-containing protein.	0.961
NAT10	V5EKX6_KALBG	V5EVF9	V5EKX6	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.989
NAT10	V5ELV7_KALBG	V5EVF9	V5ELV7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	GN3L_Grn1 domain-containing protein.	0.914
NAT10	V5ENW2_KALBG	V5EVF9	V5ENW2	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.960
NAT10	V5EPL4_KALBG	V5EVF9	V5EPL4	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	BP28CT domain-containing protein.	0.993
NAT10	V5EPQ1_KALBG	V5EVF9	V5EPQ1	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.864
NAT10	V5EQV7_KALBG	V5EVF9	V5EQV7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	TruB_N domain-containing protein.	0.795
NAT10	V5ERJ6_KALBG	V5EVF9	V5ERJ6	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Putative periodic tryptophan protein PWP2.	0.998
NAT10	V5ERR9_KALBG	V5EVF9	V5ERR9	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosome biogenesis protein-Nop58p/Nop5p.	0.998
NAT10	V5ESC7_KALBG	V5EVF9	V5ESC7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Putative IMP3-component of the U3 small nucleolar ribonucleoprotein.	0.925
NAT10	V5ET01_KALBG	V5EVF9	V5ET01	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.439
NAT10	V5ETH0_KALBG	V5EVF9	V5ETH0	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.981
NAT10	V5ETI3_KALBG	V5EVF9	V5ETI3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	WD_REPEATS_REGION domain-containing protein.	0.993