STRINGSTRING
AYL99_08639 AYL99_08639 AYL99_07690 AYL99_07690 AYL99_09142 AYL99_09142 AYL99_07925 AYL99_07925 AYL99_07987 AYL99_07987 AYL99_08568 AYL99_08568 AYL99_07729 AYL99_07729 AYL99_07551 AYL99_07551 AYL99_07185 AYL99_07185 AYL99_06279 AYL99_06279 AYL99_06526 AYL99_06526 AYL99_10722 AYL99_10722 ERB1 ERB1 AYL99_06742 AYL99_06742 AYL99_06857 AYL99_06857 AYL99_08565 AYL99_08565 AYL99_08369 AYL99_08369 AYL99_07617 AYL99_07617 AYL99_11565 AYL99_11565 AYL99_11257 AYL99_11257 AYL99_11300 AYL99_11300 AYL99_10630 AYL99_10630 AYL99_10634 AYL99_10634 AYL99_08774 AYL99_08774 AYL99_09635 AYL99_09635 AYL99_10045 AYL99_10045 AYL99_01595 AYL99_01595 AYL99_01143 AYL99_01143 AYL99_01059 AYL99_01059 AYL99_00960 AYL99_00960 AYL99_01002 AYL99_01002 AYL99_00849 AYL99_00849 AYL99_00724 AYL99_00724 AYL99_00225 AYL99_00225 AYL99_00032 AYL99_00032 AYL99_02724 AYL99_02724 AYL99_02140 AYL99_02140 NAT10 NAT10 SPB1 SPB1 AYL99_04608 AYL99_04608 AYL99_02307 AYL99_02307 AYL99_06192 AYL99_06192 AYL99_04760 AYL99_04760 AYL99_06551 AYL99_06551 AYL99_04743 AYL99_04743 AYL99_04778 AYL99_04778 AYL99_06941 AYL99_06941 AYL99_05350 AYL99_05350 AYL99_05254 AYL99_05254 AYL99_05434 AYL99_05434 AYL99_05165 AYL99_05165 AYL99_05830 AYL99_05830 AYL99_05856 AYL99_05856 AYL99_05653 AYL99_05653 AYL99_05598 AYL99_05598 AYL99_03495 AYL99_03495 AYL99_05765 AYL99_05765 AYL99_03941 AYL99_03941 AYL99_04122 AYL99_04122 AYL99_03386 AYL99_03386 AYL99_03854 AYL99_03854 AYL99_04291 AYL99_04291 AYL99_04214 AYL99_04214 AYL99_04525 AYL99_04525 AYL99_04334 AYL99_04334 AYL99_04396 AYL99_04396 AYL99_02026 AYL99_02026 AYL99_02027 AYL99_02027 AYL99_02214 AYL99_02214 AYL99_09603 AYL99_09603 AYL99_09579 AYL99_09579 AYL99_09523 AYL99_09523 AYL99_09331 AYL99_09331 AYL99_09289 AYL99_09289 YTM1 YTM1 AYL99_09824 AYL99_09824 AYL99_09774 AYL99_09774 NOP7 NOP7 AYL99_10421 AYL99_10421 AYL99_10320 AYL99_10320 AYL99_10756 AYL99_10756 AYL99_09462 AYL99_09462 AYL99_11318 AYL99_11318 AYL99_09522 AYL99_09522
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AYL99_08639Brix domain-containing protein. (296 aa)
AYL99_07690HMG box domain-containing protein. (324 aa)
AYL99_09142Protein MAK16; Belongs to the MAK16 family. (323 aa)
AYL99_07925S4 RNA-binding domain-containing protein. (188 aa)
AYL99_07987Uncharacterized protein. (327 aa)
AYL99_08568Uncharacterized protein. (344 aa)
AYL99_07729U3 small nucleolar RNA-associated protein 22. (1147 aa)
AYL99_07551HAD_SAK_1 domain-containing protein. (569 aa)
AYL99_0718540S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (264 aa)
AYL99_06279Uncharacterized protein. (394 aa)
AYL99_06526Brix domain-containing protein. (459 aa)
AYL99_10722Uncharacterized protein. (929 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (785 aa)
AYL99_06742Bms1-type G domain-containing protein. (1185 aa)
AYL99_06857Uncharacterized protein. (803 aa)
AYL99_08565Brix domain-containing protein. (333 aa)
AYL99_08369Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4834 aa)
AYL99_07617C2H2-type domain-containing protein. (118 aa)
AYL99_11565Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (318 aa)
AYL99_11257rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (403 aa)
AYL99_11300CBF domain-containing protein. (294 aa)
AYL99_10630WD_REPEATS_REGION domain-containing protein. (997 aa)
AYL99_10634WD_REPEATS_REGION domain-containing protein. (601 aa)
AYL99_08774Brix domain-containing protein. (437 aa)
AYL99_09635WD_REPEATS_REGION domain-containing protein. (443 aa)
AYL99_10045WD_REPEATS_REGION domain-containing protein. (559 aa)
AYL99_01595WD_REPEATS_REGION domain-containing protein. (533 aa)
AYL99_01143Uncharacterized protein. (757 aa)
AYL99_01059Sas10 domain-containing protein. (583 aa)
AYL99_00960Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
AYL99_01002U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (289 aa)
AYL99_00849RNA helicase. (869 aa)
AYL99_00724Uncharacterized protein. (276 aa)
AYL99_00225Uncharacterized protein. (704 aa)
AYL99_00032Uncharacterized protein. (304 aa)
AYL99_02724Uncharacterized protein. (907 aa)
AYL99_02140Uncharacterized protein. (1799 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1118 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (834 aa)
AYL99_04608WD_REPEATS_REGION domain-containing protein. (999 aa)
AYL99_02307Uncharacterized protein. (385 aa)
AYL99_06192Uncharacterized protein. (366 aa)
AYL99_04760KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (337 aa)
AYL99_06551Nucleolar protein 58. (654 aa)
AYL99_04743Nop domain-containing protein. (506 aa)
AYL99_0477818S rRNA biogenesis protein RCL1. (407 aa)
AYL99_0694140S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
AYL99_05350WD_REPEATS_REGION domain-containing protein. (967 aa)
AYL99_05254WD_REPEATS_REGION domain-containing protein. (1021 aa)
AYL99_05434Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (661 aa)
AYL99_05165Uncharacterized protein. (531 aa)
AYL99_05830Kri1_C domain-containing protein. (601 aa)
AYL99_05856PUM-HD domain-containing protein. (668 aa)
AYL99_05653Uncharacterized protein. (758 aa)
AYL99_05598Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (487 aa)
AYL99_03495Uncharacterized protein. (1259 aa)
AYL99_05765U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (723 aa)
AYL99_03941WD_REPEATS_REGION domain-containing protein. (889 aa)
AYL99_04122WD_REPEATS_REGION domain-containing protein. (596 aa)
AYL99_03386Uncharacterized protein. (464 aa)
AYL99_0385420S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (444 aa)
AYL99_04291NUC153 domain-containing protein. (725 aa)
AYL99_04214BUD22 domain-containing protein. (423 aa)
AYL99_04525Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (565 aa)
AYL99_0433440S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (260 aa)
AYL99_04396PINc domain-containing protein. (192 aa)
AYL99_02026Uncharacterized protein. (225 aa)
AYL99_02027Uncharacterized protein. (364 aa)
AYL99_02214RIO domain-containing protein. (383 aa)
AYL99_09603Uncharacterized protein. (385 aa)
AYL99_09579ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (481 aa)
AYL99_0952360S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (186 aa)
AYL99_09331CP-type G domain-containing protein. (554 aa)
AYL99_09289rRNA 2'-O-methyltransferase fibrillarin. (313 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (466 aa)
AYL99_09824Ribosome biogenesis protein NSA2. (261 aa)
AYL99_09774DRIM domain-containing protein. (2576 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (671 aa)
AYL99_10421Uncharacterized protein. (387 aa)
AYL99_10320Bms1-type G domain-containing protein. (852 aa)
AYL99_10756Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (239 aa)
AYL99_09462Uncharacterized protein. (1113 aa)
AYL99_11318Uncharacterized protein. (274 aa)
AYL99_09522Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (688 aa)
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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