42 items (Fonsecaea erecta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AYL99_10103	RRM domain-containing protein. (178 aa)
	AYL99_09883	Uncharacterized protein. (634 aa)
	AYL99_10161	Uncharacterized protein. (338 aa)
	AYL99_10788	RING-type domain-containing protein. (270 aa)
	AYL99_11574	COP9 signalosome complex subunit 2. (517 aa)
	AYL99_12028	BZIP domain-containing protein. (129 aa)
	AYL99_05270	Uncharacterized protein. (1175 aa)
	AYL99_05600	BZIP domain-containing protein. (434 aa)
	AYL99_05809	DNA-directed RNA polymerase II subunit K. (74 aa)
	AYL99_03365	RING-box protein 1A. (124 aa)
	AYL99_03607	CYCLIN domain-containing protein; Belongs to the cyclin family. (387 aa)
	AYL99_03891	Uncharacterized protein. (847 aa)
	AYL99_03950	Uncharacterized protein. (943 aa)
	AYL99_03994	WD_REPEATS_REGION domain-containing protein. (534 aa)
	AYL99_04407	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (421 aa)
	AYL99_01901	Uncharacterized protein. (442 aa)
	AYL99_04519	RNA_pol_L_2 domain-containing protein. (274 aa)
	AYL99_02164	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	AYL99_02417	DNA-directed RNA polymerase II subunit G. (170 aa)
	AYL99_02203	DNA-directed RNA polymerase II subunit C. (336 aa)
	AYL99_02418	Uncharacterized protein. (556 aa)
	AYL99_02210	CULLIN_2 domain-containing protein; Belongs to the cullin family. (902 aa)
	AYL99_02896	DNA-directed RNA polymerase II subunit D. (152 aa)
	AYL99_02884	PCI domain-containing protein. (421 aa)
	AYL99_01398	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	AYL99_01214	Uncharacterized protein. (312 aa)
	AYL99_00277	PCI domain-containing protein. (329 aa)
	AYL99_00924	CPSF_A domain-containing protein. (1197 aa)
	AYL99_00604	VWFA domain-containing protein. (226 aa)
	AYL99_00078	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1762 aa)
	AYL99_00451	Cyclin H; Belongs to the cyclin family. (373 aa)
	AYL99_00074	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1258 aa)
	AYL99_02868	DNA-directed RNA polymerase II subunit F. (153 aa)
	AYL99_02823	PCI domain-containing protein. (486 aa)
	AYL99_02996	Polyubiquitin. (229 aa)
	AYL99_01437	Uncharacterized protein. (491 aa)
	AYL99_06203	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (510 aa)
	AYL99_08100	MPN domain-containing protein. (370 aa)
	AYL99_08875	MPN domain-containing protein. (460 aa)
	AYL99_09735	DNA repair helicase rad15. (815 aa)
	AYL99_09402	Uncharacterized protein. (1136 aa)
	AYL99_09681	Uncharacterized protein. (231 aa)

Your Current Organism:

Fonsecaea erecta

NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AYL99_00074	AYL99_00078	A0A178ZWN7	A0A178ZXH1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
AYL99_00074	AYL99_00451	A0A178ZWN7	A0A178ZXD7	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Cyclin H; Belongs to the cyclin family.	0.902
AYL99_00074	AYL99_00604	A0A178ZWN7	A0A178ZY47	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	VWFA domain-containing protein.	0.977
AYL99_00074	AYL99_00924	A0A178ZWN7	A0A178ZYZ9	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CPSF_A domain-containing protein.	0.930
AYL99_00074	AYL99_01398	A0A178ZWN7	A0A179A1K2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ubiquitin-40S ribosomal protein S27a.	0.676
AYL99_00074	AYL99_01437	A0A178ZWN7	A0A179A2V0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.677
AYL99_00074	AYL99_01901	A0A178ZWN7	A0A178ZS68	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.976
AYL99_00074	AYL99_02164	A0A178ZWN7	A0A178ZT11	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
AYL99_00074	AYL99_02203	A0A178ZWN7	A0A178ZU01	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II subunit C.	0.999
AYL99_00074	AYL99_02210	A0A178ZWN7	A0A178ZUR6	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.860
AYL99_00074	AYL99_02417	A0A178ZWN7	A0A178ZTT0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II subunit G.	0.999
AYL99_00074	AYL99_02418	A0A178ZWN7	A0A178ZUR1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.981
AYL99_00074	AYL99_02823	A0A178ZWN7	A0A178ZVZ1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	PCI domain-containing protein.	0.674
AYL99_00074	AYL99_02868	A0A178ZWN7	A0A178ZW10	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II subunit F.	0.999
AYL99_00074	AYL99_02884	A0A178ZWN7	A0A178ZVD0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	PCI domain-containing protein.	0.671
AYL99_00074	AYL99_02896	A0A178ZWN7	A0A178ZV81	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II subunit D.	0.999
AYL99_00074	AYL99_02996	A0A178ZWN7	A0A178ZVH7	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polyubiquitin.	0.713
AYL99_00074	AYL99_03365	A0A178ZWN7	A0A178ZMW9	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RING-box protein 1A.	0.891
AYL99_00074	AYL99_03607	A0A178ZWN7	A0A178ZNJ8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.902
AYL99_00074	AYL99_03891	A0A178ZWN7	A0A178ZPD7	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.981