33 items (Fonsecaea erecta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AYL99_02996	Polyubiquitin. (229 aa)
	AYL99_12028	BZIP domain-containing protein. (129 aa)
	AYL99_10953	Uncharacterized protein. (771 aa)
	AYL99_10865	RING-type domain-containing protein. (1413 aa)
	AYL99_09561	Uncharacterized protein. (947 aa)
	AYL99_09967	Uncharacterized protein. (316 aa)
	AYL99_09727	Uncharacterized protein. (399 aa)
	AYL99_09726	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
	AYL99_08149	Uncharacterized protein. (970 aa)
	AYL99_07352	Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family. (186 aa)
	AYL99_07356	Uncharacterized protein. (1020 aa)
	AYL99_07768	Histone H2B; Belongs to the histone H2B family. (141 aa)
	AYL99_07325	Helicase ATP-binding domain-containing protein. (2265 aa)
	AYL99_07811	Plus3 domain-containing protein. (617 aa)
	AYL99_06582	UBIQUITIN_CONJUGAT_2 domain-containing protein. (284 aa)
	AYL99_06982	Uncharacterized protein. (1249 aa)
	AYL99_06791	Uncharacterized protein. (496 aa)
	AYL99_06743	Uncharacterized protein. (412 aa)
	AYL99_05332	UBIQUITIN_CONJUGAT_2 domain-containing protein. (221 aa)
	AYL99_05600	BZIP domain-containing protein. (434 aa)
	AYL99_05701	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (321 aa)
	AYL99_03429	Uncharacterized protein. (965 aa)
	AYL99_03608	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (244 aa)
	AYL99_04106	Uncharacterized protein. (293 aa)
	AYL99_01854	RING-type domain-containing protein. (194 aa)
	AYL99_02411	Uncharacterized protein. (630 aa)
	AYL99_01850	Uncharacterized protein. (1160 aa)
	AYL99_03181	Uncharacterized protein. (458 aa)
	AYL99_03247	Uncharacterized protein. (1080 aa)
	AYL99_01646	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (254 aa)
	AYL99_01105	Uncharacterized protein. (1166 aa)
	AYL99_01398	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	AYL99_01237	Uncharacterized protein. (433 aa)

Your Current Organism:

Fonsecaea erecta

NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AYL99_01105	AYL99_01237	A0A179A127	A0A179A299	Uncharacterized protein.	Uncharacterized protein.	0.471
AYL99_01105	AYL99_01398	A0A179A127	A0A179A1K2	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.497
AYL99_01105	AYL99_02996	A0A179A127	A0A178ZVH7	Uncharacterized protein.	Polyubiquitin.	0.561
AYL99_01105	AYL99_05600	A0A179A127	A0A178ZLB9	Uncharacterized protein.	BZIP domain-containing protein.	0.497
AYL99_01105	AYL99_06791	A0A179A127	A0A178ZJX6	Uncharacterized protein.	Uncharacterized protein.	0.605
AYL99_01105	AYL99_07768	A0A179A127	A0A178ZFY2	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.575
AYL99_01105	AYL99_10865	A0A179A127	A0A178Z7Z8	Uncharacterized protein.	RING-type domain-containing protein.	0.411
AYL99_01105	AYL99_12028	A0A179A127	A0A178Z1U9	Uncharacterized protein.	BZIP domain-containing protein.	0.497
AYL99_01237	AYL99_01105	A0A179A299	A0A179A127	Uncharacterized protein.	Uncharacterized protein.	0.471
AYL99_01237	AYL99_01398	A0A179A299	A0A179A1K2	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.805
AYL99_01237	AYL99_01646	A0A179A299	A0A179A0L3	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.528
AYL99_01237	AYL99_01850	A0A179A299	A0A178ZTV1	Uncharacterized protein.	Uncharacterized protein.	0.471
AYL99_01237	AYL99_01854	A0A179A299	A0A178ZS32	Uncharacterized protein.	RING-type domain-containing protein.	0.743
AYL99_01237	AYL99_02996	A0A179A299	A0A178ZVH7	Uncharacterized protein.	Polyubiquitin.	0.820
AYL99_01237	AYL99_03181	A0A179A299	A0A178ZVX9	Uncharacterized protein.	Uncharacterized protein.	0.495
AYL99_01237	AYL99_03247	A0A179A299	A0A178ZW44	Uncharacterized protein.	Uncharacterized protein.	0.471
AYL99_01237	AYL99_03429	A0A179A299	A0A178ZN37	Uncharacterized protein.	Uncharacterized protein.	0.471
AYL99_01237	AYL99_03608	A0A179A299	A0A178ZQX0	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.833
AYL99_01237	AYL99_04106	A0A179A299	A0A178ZRS6	Uncharacterized protein.	Uncharacterized protein.	0.471
AYL99_01237	AYL99_05332	A0A179A299	A0A178ZKK5	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.632