STRINGSTRING
fcl-2 fcl-2 gmd gmd GCA_900166605_00459 GCA_900166605_00459 uge uge MHA01_06100 MHA01_06100 GCA_900166605_00468 GCA_900166605_00468 GCA_900166605_00473 GCA_900166605_00473 GCA_900166605_00474 GCA_900166605_00474 GCA_900166605_00475 GCA_900166605_00475 GCA_900166605_00476 GCA_900166605_00476 fcl fcl glmU glmU maa maa GCA_900166605_00478 GCA_900166605_00478 MHA01_05380 MHA01_05380 MHA01_29560 MHA01_29560 galE galE gtaB1 gtaB1 tuaD tuaD MHA01_19330 MHA01_19330 GCA_900166605_01835 GCA_900166605_01835 MHA01_06240 MHA01_06240
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fcl-2Unannotated protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (318 aa)
gmdUnannotated protein; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (332 aa)
GCA_900166605_00459Unannotated protein. (195 aa)
ugeUnannotated protein. (348 aa)
MHA01_06100Unannotated protein. (613 aa)
GCA_900166605_00468Unannotated protein. (289 aa)
GCA_900166605_00473Unannotated protein. (326 aa)
GCA_900166605_00474Unannotated protein. (398 aa)
GCA_900166605_00475Unannotated protein. (351 aa)
GCA_900166605_00476Unannotated protein. (211 aa)
fclUnannotated protein. (307 aa)
glmUUnannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (462 aa)
maaUnannotated protein. (186 aa)
GCA_900166605_00478Unannotated protein. (392 aa)
MHA01_05380Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 1 family. (321 aa)
MHA01_29560Unannotated protein. (411 aa)
galEUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (337 aa)
gtaB1Unannotated protein. (295 aa)
tuaDUnannotated protein. (433 aa)
MHA01_19330Unannotated protein. (159 aa)
GCA_900166605_01835Unannotated protein. (168 aa)
MHA01_06240Unannotated protein. (462 aa)
Your Current Organism:
Marinococcus halophilus
NCBI taxonomy Id: 1371
Other names: ATCC 27964, CCM 2706, CIP 104819, DSM 20408, IAM 12844, JCM 2479, KCTC 2843, LMG 17439, LMG:17439, NBRC 102359, Planococcus halophilus, strain HK 718
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