STRINGSTRING
RAB9A RAB9A RAB9B RAB9B BLZF1 BLZF1 GORASP2 GORASP2 TBC1D16 TBC1D16 RABEP2 RABEP2 RAB4A RAB4A RAB5B RAB5B VPS11 VPS11 RAB14 RAB14 K7FB03_PELSI K7FB03_PELSI GAPVD1 GAPVD1 RAB3GAP1 RAB3GAP1 RAB26 RAB26 RMC1 RMC1 RABGEF1 RABGEF1 RAB42 RAB42 GGA2 GGA2 RAB5A RAB5A RABEP1 RABEP1 RAB3GAP2 RAB3GAP2 CHM CHM VPS45 VPS45 RBSN RBSN VPS39 VPS39 RAB19 RAB19 RAB2B RAB2B RAB31 RAB31 K7FQH3_PELSI K7FQH3_PELSI MON1B MON1B RAB36 RAB36 GGA1 GGA1 RAB22A RAB22A RAB41 RAB41 GCC2 GCC2 RABGGTB RABGGTB PTAR1 PTAR1 RAB39A RAB39A VAMP7 VAMP7 RAB2A RAB2A ANKRD27 ANKRD27 LOC102444442 LOC102444442 GDI2 GDI2 VPS33A VPS33A K7G3G9_PELSI K7G3G9_PELSI USP6NL USP6NL CCZ1 CCZ1 VPS18 VPS18 LOC102457209 LOC102457209 ZFAND5 ZFAND5 RAB5C RAB5C RABGAP1L RABGAP1L K7GAD3_PELSI K7GAD3_PELSI RAB20 RAB20 TGFBRAP1 TGFBRAP1 TSNARE1 TSNARE1 RAB23 RAB23 RAB38 RAB38 PLEKHM2 PLEKHM2 TBC1D2B TBC1D2B K7GFP1_PELSI K7GFP1_PELSI RAB17 RAB17 VPS8 VPS8 VPS41 VPS41 RUFY1 RUFY1 EEA1 EEA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAB9ARAB9A, member RAS oncogene family. (201 aa)
RAB9BRAB9B, member RAS oncogene family. (201 aa)
BLZF1Basic leucine zipper nuclear factor 1. (399 aa)
GORASP2Golgi reassembly stacking protein 2. (426 aa)
TBC1D16TBC1 domain family member 16. (762 aa)
RABEP2Rabaptin, RAB GTPase binding effector protein 2. (428 aa)
RAB4ARAB4A, member RAS oncogene family. (220 aa)
RAB5BRAB5B, member RAS oncogene family. (217 aa)
VPS11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (877 aa)
RAB14RAB14, member RAS oncogene family. (215 aa)
K7FB03_PELSIUncharacterized protein. (184 aa)
GAPVD1GTPase activating protein and VPS9 domains 1. (1461 aa)
RAB3GAP1RAB3 GTPase activating protein catalytic subunit 1. (967 aa)
RAB26RAB26, member RAS oncogene family. (208 aa)
RMC1Regulator of MON1-CCZ1. (656 aa)
RABGEF1Uncharacterized protein. (578 aa)
RAB42RAB42, member RAS oncogene family. (223 aa)
GGA2Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (580 aa)
RAB5ARAB5A, member RAS oncogene family. (215 aa)
RABEP1Rabaptin, RAB GTPase binding effector protein 1. (860 aa)
RAB3GAP2RAB3 GTPase activating non-catalytic protein subunit 2. (1397 aa)
CHMRab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (623 aa)
VPS45Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. (570 aa)
RBSNRabenosyn, RAB effector. (788 aa)
VPS39VPS39 subunit of HOPS complex. (865 aa)
RAB19RAB19, member RAS oncogene family. (215 aa)
RAB2BRAB2B, member RAS oncogene family. (181 aa)
RAB31RAB31, member RAS oncogene family. (195 aa)
K7FQH3_PELSIVacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (815 aa)
MON1BMON1 homolog B, secretory trafficking associated. (436 aa)
RAB36RAB36, member RAS oncogene family. (266 aa)
GGA1Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (660 aa)
RAB22ARAB22A, member RAS oncogene family. (194 aa)
RAB41RAB41, member RAS oncogene family. (193 aa)
GCC2GRIP and coiled-coil domain containing 2. (1667 aa)
RABGGTBGeranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (331 aa)
PTAR1Protein prenyltransferase alpha subunit repeat containing 1. (383 aa)
RAB39ARAB39A, member RAS oncogene family. (213 aa)
VAMP7Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
RAB2ARAB2A, member RAS oncogene family. (212 aa)
ANKRD27Ankyrin repeat domain 27. (1065 aa)
LOC102444442Uncharacterized protein. (252 aa)
GDI2Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)
VPS33AUncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (569 aa)
K7G3G9_PELSIUncharacterized protein. (468 aa)
USP6NLUSP6 N-terminal like. (842 aa)
CCZ1Uncharacterized protein. (482 aa)
VPS18VPS18 core subunit of CORVET and HOPS complexes. (974 aa)
LOC102457209Rab-GAP TBC domain-containing protein. (401 aa)
ZFAND5Zinc finger AN1-type containing 5. (211 aa)
RAB5CUncharacterized protein. (216 aa)
RABGAP1LRAB GTPase activating protein 1 like. (1058 aa)
K7GAD3_PELSIUncharacterized protein. (212 aa)
RAB20RAB20, member RAS oncogene family. (234 aa)
TGFBRAP1Transforming growth factor beta receptor associated protein 1. (875 aa)
TSNARE1t-SNARE domain containing 1. (218 aa)
RAB23RAB23, member RAS oncogene family. (237 aa)
RAB38RAB38, member RAS oncogene family. (212 aa)
PLEKHM2Pleckstrin homology and RUN domain containing M2. (901 aa)
TBC1D2BTBC1 domain family member 2B. (841 aa)
K7GFP1_PELSIUncharacterized protein. (296 aa)
RAB17RAB17, member RAS oncogene family. (237 aa)
VPS8RING-type domain-containing protein. (861 aa)
VPS41Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (854 aa)
RUFY1RUN and FYVE domain containing 1. (693 aa)
EEA1Early endosome antigen 1. (1409 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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