7 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB5B	RAB5B, member RAS oncogene family. (217 aa)
	RABGEF1	Uncharacterized protein. (578 aa)
	RAB5A	RAB5A, member RAS oncogene family. (215 aa)
	RABEP1	Rabaptin, RAB GTPase binding effector protein 1. (860 aa)
	GGA1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (660 aa)
	RAB5C	Uncharacterized protein. (216 aa)
	EEA1	Early endosome antigen 1. (1409 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEA1	RAB5A	ENSPSIP00000020546	ENSPSIP00000007889	Early endosome antigen 1.	RAB5A, member RAS oncogene family.	0.929
EEA1	RAB5B	ENSPSIP00000020546	ENSPSIP00000003195	Early endosome antigen 1.	RAB5B, member RAS oncogene family.	0.929
EEA1	RAB5C	ENSPSIP00000020546	ENSPSIP00000016824	Early endosome antigen 1.	Uncharacterized protein.	0.929
EEA1	RABEP1	ENSPSIP00000020546	ENSPSIP00000008066	Early endosome antigen 1.	Rabaptin, RAB GTPase binding effector protein 1.	0.678
EEA1	RABGEF1	ENSPSIP00000020546	ENSPSIP00000007267	Early endosome antigen 1.	Uncharacterized protein.	0.774
GGA1	RAB5A	ENSPSIP00000010903	ENSPSIP00000007889	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	RAB5A, member RAS oncogene family.	0.470
GGA1	RAB5B	ENSPSIP00000010903	ENSPSIP00000003195	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	RAB5B, member RAS oncogene family.	0.470
GGA1	RAB5C	ENSPSIP00000010903	ENSPSIP00000016824	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Uncharacterized protein.	0.470
GGA1	RABEP1	ENSPSIP00000010903	ENSPSIP00000008066	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Rabaptin, RAB GTPase binding effector protein 1.	0.948
GGA1	RABGEF1	ENSPSIP00000010903	ENSPSIP00000007267	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Uncharacterized protein.	0.968
RAB5A	EEA1	ENSPSIP00000007889	ENSPSIP00000020546	RAB5A, member RAS oncogene family.	Early endosome antigen 1.	0.929
RAB5A	GGA1	ENSPSIP00000007889	ENSPSIP00000010903	RAB5A, member RAS oncogene family.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.470
RAB5A	RAB5B	ENSPSIP00000007889	ENSPSIP00000003195	RAB5A, member RAS oncogene family.	RAB5B, member RAS oncogene family.	0.901
RAB5A	RAB5C	ENSPSIP00000007889	ENSPSIP00000016824	RAB5A, member RAS oncogene family.	Uncharacterized protein.	0.900
RAB5A	RABEP1	ENSPSIP00000007889	ENSPSIP00000008066	RAB5A, member RAS oncogene family.	Rabaptin, RAB GTPase binding effector protein 1.	0.781
RAB5A	RABGEF1	ENSPSIP00000007889	ENSPSIP00000007267	RAB5A, member RAS oncogene family.	Uncharacterized protein.	0.956
RAB5B	EEA1	ENSPSIP00000003195	ENSPSIP00000020546	RAB5B, member RAS oncogene family.	Early endosome antigen 1.	0.929
RAB5B	GGA1	ENSPSIP00000003195	ENSPSIP00000010903	RAB5B, member RAS oncogene family.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.470
RAB5B	RAB5A	ENSPSIP00000003195	ENSPSIP00000007889	RAB5B, member RAS oncogene family.	RAB5A, member RAS oncogene family.	0.901
RAB5B	RAB5C	ENSPSIP00000003195	ENSPSIP00000016824	RAB5B, member RAS oncogene family.	Uncharacterized protein.	0.901