(16 nodes) Mixed, incl. Lipoma HMGIC fusion partner-like protein, and TMC domain network (Pelodiscus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LHFPL4	LHFPL tetraspan subfamily member 4. (79 aa)
	LHFPL3	Uncharacterized protein. (132 aa)
	K7F7U1_PELSI	Uncharacterized protein. (76 aa)
	TMC2	Transmembrane channel-like protein. (865 aa)
	CIB1	Calcium and integrin binding 1. (190 aa)
	LHFPL5	LHFPL tetraspan subfamily member 5. (221 aa)
	K7FIE1_PELSI	CA domain-containing protein. (109 aa)
	PCDH15	Protocadherin related 15. (1004 aa)
	CDH23	Cadherin related 23. (3219 aa)
	TMIE	Uncharacterized protein. (208 aa)
	TMC1	Transmembrane channel-like protein. (788 aa)
	K7GAZ6_PELSI	Uncharacterized protein. (1174 aa)
	K7GBP1_PELSI	Uncharacterized protein. (484 aa)
	CDHR5	Uncharacterized protein. (865 aa)
	CIB3	Calcium and integrin binding family member 3. (181 aa)
	CIB2	Uncharacterized protein. (187 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDH23	CDHR5	ENSPSIP00000009444	ENSPSIP00000017977	Cadherin related 23.	Uncharacterized protein.	0.763
CDH23	K7FIE1_PELSI	ENSPSIP00000009444	ENSPSIP00000007801	Cadherin related 23.	CA domain-containing protein.	0.899
CDH23	K7GAZ6_PELSI	ENSPSIP00000009444	ENSPSIP00000017457	Cadherin related 23.	Uncharacterized protein.	0.763
CDH23	K7GBP1_PELSI	ENSPSIP00000009444	ENSPSIP00000017702	Cadherin related 23.	Uncharacterized protein.	0.724
CDH23	PCDH15	ENSPSIP00000009444	ENSPSIP00000009388	Cadherin related 23.	Protocadherin related 15.	0.763
CDHR5	CDH23	ENSPSIP00000017977	ENSPSIP00000009444	Uncharacterized protein.	Cadherin related 23.	0.763
CDHR5	K7F7U1_PELSI	ENSPSIP00000017977	ENSPSIP00000004101	Uncharacterized protein.	Uncharacterized protein.	0.489
CDHR5	K7FIE1_PELSI	ENSPSIP00000017977	ENSPSIP00000007801	Uncharacterized protein.	CA domain-containing protein.	0.763
CDHR5	LHFPL3	ENSPSIP00000017977	ENSPSIP00000004086	Uncharacterized protein.	Uncharacterized protein.	0.489
CDHR5	LHFPL4	ENSPSIP00000017977	ENSPSIP00000000631	Uncharacterized protein.	LHFPL tetraspan subfamily member 4.	0.489
CDHR5	LHFPL5	ENSPSIP00000017977	ENSPSIP00000006875	Uncharacterized protein.	LHFPL tetraspan subfamily member 5.	0.514
CIB1	TMC1	ENSPSIP00000004955	ENSPSIP00000015932	Calcium and integrin binding 1.	Transmembrane channel-like protein.	0.771
CIB1	TMC2	ENSPSIP00000004955	ENSPSIP00000004666	Calcium and integrin binding 1.	Transmembrane channel-like protein.	0.762
CIB1	TMIE	ENSPSIP00000004955	ENSPSIP00000011199	Calcium and integrin binding 1.	Uncharacterized protein.	0.464
CIB2	K7F7U1_PELSI	ENSPSIP00000018924	ENSPSIP00000004101	Uncharacterized protein.	Uncharacterized protein.	0.562
CIB2	LHFPL3	ENSPSIP00000018924	ENSPSIP00000004086	Uncharacterized protein.	Uncharacterized protein.	0.562
CIB2	LHFPL4	ENSPSIP00000018924	ENSPSIP00000000631	Uncharacterized protein.	LHFPL tetraspan subfamily member 4.	0.562
CIB2	LHFPL5	ENSPSIP00000018924	ENSPSIP00000006875	Uncharacterized protein.	LHFPL tetraspan subfamily member 5.	0.595
CIB2	TMC1	ENSPSIP00000018924	ENSPSIP00000015932	Uncharacterized protein.	Transmembrane channel-like protein.	0.898
CIB2	TMC2	ENSPSIP00000018924	ENSPSIP00000004666	Uncharacterized protein.	Transmembrane channel-like protein.	0.861