STRINGSTRING
LOC102452578 LOC102452578 LOC102452839 LOC102452839 LOC102453087 LOC102453087 LOC106732714 LOC106732714 K7EXK8_PELSI K7EXK8_PELSI LOC102454071 LOC102454071 LOC102445301 LOC102445301 LOC102454558 LOC102454558 LOC102454821 LOC102454821 LOC102455079 LOC102455079 LOC102455336 LOC102455336 LOC102455573 LOC102455573 LOC102455816 LOC102455816 LOC102459197 LOC102459197 LOC102444105 LOC102444105 LOC102461453 LOC102461453 LOC102445328 LOC102445328 ENSPSIP00000001420 ENSPSIP00000001420 LOC102447009 LOC102447009 LOC102446769 LOC102446769 LOC102448415 LOC102448415 LOC102448654 LOC102448654 LOC102448896 LOC102448896 ENSPSIP00000001542 ENSPSIP00000001542 LOC102450092 LOC102450092 LOC102450562 LOC102450562 LOC102450788 LOC102450788 LOC102451028 LOC102451028 LOC102451747 LOC102451747 LOC102451988 LOC102451988 ENSPSIP00000001666 ENSPSIP00000001666 K7F7E8_PELSI K7F7E8_PELSI LOC102449128 LOC102449128 MYSM1 MYSM1 MACROH2A1 MACROH2A1 K7FUK6_PELSI K7FUK6_PELSI PLEKHA1 PLEKHA1 H2AX H2AX KDM6A KDM6A CECR2 CECR2 KDM1B KDM1B MACROH2A2 MACROH2A2 RUNX2 RUNX2 GLYR1 GLYR1 LOC102444530-2 LOC102444530-2 SETD2 SETD2 LOC102444530-3 LOC102444530-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102452578Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102452839Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC102453087Histone H2B 8. (126 aa)
LOC106732714Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
K7EXK8_PELSIHistone domain-containing protein. (97 aa)
LOC102454071Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (109 aa)
LOC102445301Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC102454558Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC102454821Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102455079Histone H2A type 2-C-like. (129 aa)
LOC102455336Histone H2A; Belongs to the histone H2A family. (158 aa)
LOC102455573Histone H2B 8. (126 aa)
LOC102455816Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC102459197Histone H2A; Belongs to the histone H2A family. (145 aa)
LOC102444105Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102461453Histone H2A; Belongs to the histone H2A family. (131 aa)
LOC102445328Histone H2A; Belongs to the histone H2A family. (129 aa)
ENSPSIP00000001420annotation not available (103 aa)
LOC102447009Histone H2A.J. (129 aa)
LOC102446769Histone H2B 8. (126 aa)
LOC102448415Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (107 aa)
LOC102448654Histone H4. (107 aa)
LOC102448896Histone H2A.J. (131 aa)
ENSPSIP00000001542annotation not available (103 aa)
LOC102450092Histone H4. (103 aa)
LOC102450562Histone H4. (103 aa)
LOC102450788Histone H4. (103 aa)
LOC102451028Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC102451747Histone H2B 1/2/3/4/6. (126 aa)
LOC102451988Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSPSIP00000001666annotation not available (136 aa)
K7F7E8_PELSIHistone H2B; Belongs to the histone H2B family. (134 aa)
LOC102449128Histone H2B; Belongs to the histone H2B family. (134 aa)
MYSM1Myb like, SWIRM and MPN domains 1. (759 aa)
MACROH2A1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
K7FUK6_PELSIJmjC domain-containing protein. (503 aa)
PLEKHA1Pleckstrin homology domain containing A1. (399 aa)
H2AXHistone H2A; Belongs to the histone H2A family. (127 aa)
KDM6AUncharacterized protein. (1289 aa)
CECR2CECR2 histone acetyl-lysine reader. (1199 aa)
KDM1BLysine demethylase 1B. (772 aa)
MACROH2A2Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
RUNX2Runt-related transcription factor. (360 aa)
GLYR1Glyoxylate reductase 1 homolog. (484 aa)
LOC102444530-2Histone H3.3. (136 aa)
SETD2SET domain containing 2, histone lysine methyltransferase. (2555 aa)
LOC102444530-3Histone H3.3. (136 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.