24 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PER2	Period circadian regulator 2. (1328 aa)
	K7F2M8_PELSI	Photolyase/cryptochrome alpha/beta domain-containing protein. (489 aa)
	NPAS4	Uncharacterized protein. (479 aa)
	K7F5E8_PELSI	PAS domain-containing protein. (166 aa)
	LOC102445801	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (416 aa)
	PER1	Period circadian regulator 1. (1017 aa)
	RORB	RAR related orphan receptor B. (470 aa)
	NPAS2	Neuronal PAS domain protein 2. (544 aa)
	LOC102449437	FAD_binding_7 domain-containing protein. (345 aa)
	ARNTL2	Aryl hydrocarbon receptor nuclear translocator like 2. (529 aa)
	NFIL3	Nuclear factor interleukin-3-regulated protein; May act as a transcriptional regulator of a number of proteins of the circadian clock; Belongs to the bZIP family. NFIL3 subfamily. (461 aa)
	RORA	RAR related orphan receptor A. (459 aa)
	CSNK1D	Casein kinase 1 delta. (426 aa)
	CLOCK	Clock circadian regulator. (850 aa)
	LOC102460658	Photolyase/cryptochrome alpha/beta domain-containing protein. (533 aa)
	CRY2	Cryptochrome circadian regulator 2. (521 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator-like 2. (633 aa)
	K7G473_PELSI	Photolyase/cryptochrome alpha/beta domain-containing protein. (491 aa)
	CRY1	Cryptochrome circadian regulator 1. (568 aa)
	FBXL3	F-box and leucine rich repeat protein 3. (433 aa)
	K7GDD4_PELSI	Uncharacterized protein. (848 aa)
	CUNH19orf12	Uncharacterized protein. (268 aa)
	BHLHE41	Basic helix-loop-helix family member e41. (455 aa)
	BHLHE40	Basic helix-loop-helix family member e40. (411 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL	ARNTL2	ENSPSIP00000014834	ENSPSIP00000010491	Aryl hydrocarbon receptor nuclear translocator-like 2.	Aryl hydrocarbon receptor nuclear translocator like 2.	0.698
ARNTL	BHLHE40	ENSPSIP00000014834	ENSPSIP00000020513	Aryl hydrocarbon receptor nuclear translocator-like 2.	Basic helix-loop-helix family member e40.	0.687
ARNTL	BHLHE41	ENSPSIP00000014834	ENSPSIP00000018600	Aryl hydrocarbon receptor nuclear translocator-like 2.	Basic helix-loop-helix family member e41.	0.709
ARNTL	CLOCK	ENSPSIP00000014834	ENSPSIP00000012909	Aryl hydrocarbon receptor nuclear translocator-like 2.	Clock circadian regulator.	0.921
ARNTL	CRY1	ENSPSIP00000014834	ENSPSIP00000015791	Aryl hydrocarbon receptor nuclear translocator-like 2.	Cryptochrome circadian regulator 1.	0.840
ARNTL	CRY2	ENSPSIP00000014834	ENSPSIP00000014616	Aryl hydrocarbon receptor nuclear translocator-like 2.	Cryptochrome circadian regulator 2.	0.982
ARNTL	CSNK1D	ENSPSIP00000014834	ENSPSIP00000012804	Aryl hydrocarbon receptor nuclear translocator-like 2.	Casein kinase 1 delta.	0.758
ARNTL	FBXL3	ENSPSIP00000014834	ENSPSIP00000016984	Aryl hydrocarbon receptor nuclear translocator-like 2.	F-box and leucine rich repeat protein 3.	0.584
ARNTL	K7F5E8_PELSI	ENSPSIP00000014834	ENSPSIP00000003258	Aryl hydrocarbon receptor nuclear translocator-like 2.	PAS domain-containing protein.	0.669
ARNTL	K7G473_PELSI	ENSPSIP00000014834	ENSPSIP00000015084	Aryl hydrocarbon receptor nuclear translocator-like 2.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.617
ARNTL	K7GDD4_PELSI	ENSPSIP00000014834	ENSPSIP00000018295	Aryl hydrocarbon receptor nuclear translocator-like 2.	Uncharacterized protein.	0.812
ARNTL	LOC102445801	ENSPSIP00000014834	ENSPSIP00000004303	Aryl hydrocarbon receptor nuclear translocator-like 2.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.758
ARNTL	LOC102449437	ENSPSIP00000014834	ENSPSIP00000009191	Aryl hydrocarbon receptor nuclear translocator-like 2.	FAD_binding_7 domain-containing protein.	0.840
ARNTL	LOC102460658	ENSPSIP00000014834	ENSPSIP00000014447	Aryl hydrocarbon receptor nuclear translocator-like 2.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.840
ARNTL	NFIL3	ENSPSIP00000014834	ENSPSIP00000012427	Aryl hydrocarbon receptor nuclear translocator-like 2.	Nuclear factor interleukin-3-regulated protein; May act as a transcriptional regulator of a number of proteins of the circadian clock; Belongs to the bZIP family. NFIL3 subfamily.	0.626
ARNTL	NPAS2	ENSPSIP00000014834	ENSPSIP00000008045	Aryl hydrocarbon receptor nuclear translocator-like 2.	Neuronal PAS domain protein 2.	0.881
ARNTL	NPAS4	ENSPSIP00000014834	ENSPSIP00000003257	Aryl hydrocarbon receptor nuclear translocator-like 2.	Uncharacterized protein.	0.838
ARNTL	PER1	ENSPSIP00000014834	ENSPSIP00000005897	Aryl hydrocarbon receptor nuclear translocator-like 2.	Period circadian regulator 1.	0.803
ARNTL	PER2	ENSPSIP00000014834	ENSPSIP00000002179	Aryl hydrocarbon receptor nuclear translocator-like 2.	Period circadian regulator 2.	0.803
ARNTL	RORA	ENSPSIP00000014834	ENSPSIP00000012600	Aryl hydrocarbon receptor nuclear translocator-like 2.	RAR related orphan receptor A.	0.495