30 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB11B	Uncharacterized protein. (257 aa)
	RAB27A	RAB27A, member RAS oncogene family. (221 aa)
	K7F791_PELSI	Uncharacterized protein. (109 aa)
	RAP2C	RAP2C, member of RAS oncogene family. (134 aa)
	RASL11B	RAS like family 11 member B. (203 aa)
	RAB5A	RAB5A, member RAS oncogene family. (215 aa)
	ARF6	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	RAP2B	RAP2B, member of RAS oncogene family. (192 aa)
	RAB1A	RAB1A, member RAS oncogene family. (205 aa)
	RAB27B	RAB27B, member RAS oncogene family. (218 aa)
	LOC102448452	Uncharacterized protein. (250 aa)
	RASL12	RAS like family 12. (274 aa)
	LOC102458629	Uncharacterized protein. (214 aa)
	RAB11A	RAB11A, member RAS oncogene family. (236 aa)
	RAB4A	RAB4A, member RAS oncogene family. (220 aa)
	RAB5B	RAB5B, member RAS oncogene family. (217 aa)
	RERG	RAS like estrogen regulated growth inhibitor. (199 aa)
	RAP1A	RAP1A, member of RAS oncogene family. (184 aa)
	RAP2A	RAP2A, member of RAS oncogene family. (184 aa)
	RALA	RAS like proto-oncogene A. (206 aa)
	RAB17	RAB17, member RAS oncogene family. (237 aa)
	CDC42	Cell division cycle 42. (239 aa)
	MRAS	Muscle RAS oncogene homolog. (208 aa)
	LOC102463951	Uncharacterized protein. (216 aa)
	RIT2	Ras like without CAAX 2. (217 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	RALB	RAS like proto-oncogene B. (209 aa)
	RAB5C	Uncharacterized protein. (216 aa)
	K7GAD3_PELSI	Uncharacterized protein. (212 aa)
	RAP1B	RAP1B, member of RAS oncogene family. (184 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF6	K7GAD3_PELSI	ENSPSIP00000001731	ENSPSIP00000017244	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.458
ARF6	LOC102463951	ENSPSIP00000001731	ENSPSIP00000014671	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.432
ARF6	RAB11A	ENSPSIP00000001731	ENSPSIP00000013288	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	RAB11A, member RAS oncogene family.	0.432
ARF6	RAB11B	ENSPSIP00000001731	ENSPSIP00000011337	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.432
ARF6	RAB4A	ENSPSIP00000001731	ENSPSIP00000002963	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	RAB4A, member RAS oncogene family.	0.458
CDC42	RAB7A	ENSPSIP00000009910	ENSPSIP00000012786	Cell division cycle 42.	RAB7A, member RAS oncogene family.	0.544
K7GAD3_PELSI	ARF6	ENSPSIP00000017244	ENSPSIP00000001731	Uncharacterized protein.	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.458
K7GAD3_PELSI	RAB17	ENSPSIP00000017244	ENSPSIP00000019191	Uncharacterized protein.	RAB17, member RAS oncogene family.	0.491
K7GAD3_PELSI	RAB5A	ENSPSIP00000017244	ENSPSIP00000007889	Uncharacterized protein.	RAB5A, member RAS oncogene family.	0.481
K7GAD3_PELSI	RAB5B	ENSPSIP00000017244	ENSPSIP00000003195	Uncharacterized protein.	RAB5B, member RAS oncogene family.	0.493
K7GAD3_PELSI	RAB5C	ENSPSIP00000017244	ENSPSIP00000016824	Uncharacterized protein.	Uncharacterized protein.	0.479
K7GAD3_PELSI	RAB7A	ENSPSIP00000017244	ENSPSIP00000012786	Uncharacterized protein.	RAB7A, member RAS oncogene family.	0.408
LOC102458629	LOC102463951	ENSPSIP00000015066	ENSPSIP00000014671	Uncharacterized protein.	Uncharacterized protein.	0.655
LOC102458629	RAB11A	ENSPSIP00000015066	ENSPSIP00000013288	Uncharacterized protein.	RAB11A, member RAS oncogene family.	0.657
LOC102458629	RAB11B	ENSPSIP00000015066	ENSPSIP00000011337	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC102458629	RAB1A	ENSPSIP00000015066	ENSPSIP00000008820	Uncharacterized protein.	RAB1A, member RAS oncogene family.	0.901
LOC102458629	RAB7A	ENSPSIP00000015066	ENSPSIP00000012786	Uncharacterized protein.	RAB7A, member RAS oncogene family.	0.434
LOC102463951	ARF6	ENSPSIP00000014671	ENSPSIP00000001731	Uncharacterized protein.	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.432
LOC102463951	LOC102458629	ENSPSIP00000014671	ENSPSIP00000015066	Uncharacterized protein.	Uncharacterized protein.	0.655
LOC102463951	RAB11A	ENSPSIP00000014671	ENSPSIP00000013288	Uncharacterized protein.	RAB11A, member RAS oncogene family.	0.901