STRINGSTRING
F2 F2 WNT16 WNT16 MYDGF MYDGF CAT CAT LOC102462376 LOC102462376 TGFB2 TGFB2 LOC102446651 LOC102446651 KDR KDR ROR2 ROR2 PDGFC PDGFC ROR1 ROR1 LOC102443854 LOC102443854 PRR5L PRR5L CSF3 CSF3 PTPN6 PTPN6 NCF1 NCF1 PDGFB PDGFB TEK TEK FLT1 FLT1 IGF1 IGF1 SEMA4D SEMA4D NTRK3 NTRK3 PIK3AP1 PIK3AP1 NTRK1 NTRK1 UBE3A UBE3A FN1 FN1 PRR5 PRR5 UNC5B UNC5B IL18 IL18 AGT AGT NKX3-1 NKX3-1 SEMA3E SEMA3E GPER1 GPER1 DCN DCN NTRK2 NTRK2 RELN RELN K7F7A9_PELSI K7F7A9_PELSI K7F7G4_PELSI K7F7G4_PELSI PPARD PPARD SIRT1 SIRT1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F2Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (611 aa)
WNT16Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (363 aa)
MYDGFMyeloid derived growth factor. (165 aa)
CATCatalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (531 aa)
LOC102462376Uncharacterized protein; Belongs to the semaphorin family. (720 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (413 aa)
LOC102446651Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1220 aa)
KDRKinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1328 aa)
ROR2Receptor tyrosine kinase like orphan receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily. (934 aa)
PDGFCPlatelet derived growth factor C. (345 aa)
ROR1Receptor tyrosine kinase like orphan receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily. (895 aa)
LOC102443854SERPIN domain-containing protein; Belongs to the serpin family. (411 aa)
PRR5LProline rich 5 like. (366 aa)
CSF3Colony stimulating factor 3. (200 aa)
PTPN6Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (629 aa)
NCF1Neutrophil cytosolic factor 1. (390 aa)
PDGFBPlatelet derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (245 aa)
TEKTEK receptor tyrosine kinase. (1124 aa)
FLT1Fms related tyrosine kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1333 aa)
IGF1Insulin like growth factor 1. (153 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (857 aa)
NTRK3Neurotrophic receptor tyrosine kinase 3. (505 aa)
PIK3AP1Phosphoinositide-3-kinase adaptor protein 1. (666 aa)
NTRK1Tyrosine-protein kinase receptor. (732 aa)
UBE3AUbiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (882 aa)
FN1Fibronectin 1. (2389 aa)
PRR5Proline rich 5. (404 aa)
UNC5BUnc-5 netrin receptor B. (944 aa)
IL18Interleukin 18. (200 aa)
AGTAngiotensinogen; Belongs to the serpin family. (476 aa)
NKX3-1NK3 homeobox 1. (212 aa)
SEMA3ESemaphorin 3E; Belongs to the semaphorin family. (757 aa)
GPER1G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (369 aa)
DCNDecorin; May affect the rate of fibrils formation. (356 aa)
NTRK2Tyrosine-protein kinase receptor. (814 aa)
RELNUncharacterized protein. (2100 aa)
K7F7A9_PELSIUncharacterized protein. (1108 aa)
K7F7G4_PELSIReelin domain-containing protein. (177 aa)
PPARDPeroxisome proliferator activated receptor delta. (441 aa)
SIRT1Deacetylase sirtuin-type domain-containing protein. (607 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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