45 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PIP4K2A	Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha. (358 aa)
	K7GBN9_PELSI	Uncharacterized protein. (418 aa)
	BAG3	BCL2 associated athanogene 3. (558 aa)
	C9orf72	C9orf72-SMCR8 complex subunit. (481 aa)
	HTT	Huntingtin. (3096 aa)
	SUPT5H	Transcription elongation factor SPT5. (1089 aa)
	STING1	Transmembrane protein 173. (379 aa)
	HSPB8	Heat shock protein family B (small) member 8; Belongs to the small heat shock protein (HSP20) family. (203 aa)
	WDR24	WD repeat domain 24. (789 aa)
	TSC2	TSC complex subunit 2. (1816 aa)
	NOD1	Nucleotide binding oligomerization domain containing 1. (950 aa)
	SNX30	Sorting nexin family member 30. (468 aa)
	PIP4K2B	Phosphatidylinositol-5-phosphate 4-kinase type 2 beta. (364 aa)
	SESN2	Uncharacterized protein. (443 aa)
	TSC1	TSC complex subunit 1. (1168 aa)
	LRSAM1	Leucine rich repeat and sterile alpha motif containing 1. (732 aa)
	WIPI1	WD repeat domain, phosphoinositide interacting 1. (422 aa)
	RIPK2	Receptor interacting serine/threonine kinase 2. (562 aa)
	KDR	Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1328 aa)
	ATG2A	Autophagy related 2A. (2002 aa)
	SCOC	Short coiled-coil protein. (97 aa)
	ULK1	Unc-51 like autophagy activating kinase 1. (1030 aa)
	FYCO1	RUN domain-containing protein. (956 aa)
	K7FNI3_PELSI	Uncharacterized protein. (524 aa)
	K7FN03_PELSI	Protein kinase domain-containing protein. (449 aa)
	PAFAH1B2	Platelet activating factor acetylhydrolase 1b catalytic subunit 2. (229 aa)
	SESN1	Sestrin 1. (553 aa)
	SNX7	Sorting nexin 7. (442 aa)
	RAB3GAP2	RAB3 GTPase activating non-catalytic protein subunit 2. (1397 aa)
	SESN3	Sestrin 3. (496 aa)
	SPTLC1	Serine palmitoyltransferase long chain base subunit 1. (475 aa)
	K7FGU8_PELSI	PIPK domain-containing protein. (360 aa)
	AMBRA1	Autophagy and beclin 1 regulator 1. (1301 aa)
	VPS13D	Vacuolar protein sorting 13 homolog D. (4398 aa)
	SIRT1	Deacetylase sirtuin-type domain-containing protein. (607 aa)
	RAB3GAP1	RAB3 GTPase activating protein catalytic subunit 1. (967 aa)
	PINK1	PTEN induced kinase 1. (364 aa)
	K7FAV3_PELSI	Uncharacterized protein. (249 aa)
	WAC	WW domain containing adaptor with coiled-coil. (643 aa)
	EPM2A	EPM2A glucan phosphatase, laforin. (233 aa)
	SNX4	Sorting nexin 4. (441 aa)
	DCN	Decorin; May affect the rate of fibrils formation. (356 aa)
	K7F0T6_PELSI	Uncharacterized protein. (375 aa)
	BNIP3	BCL2 interacting protein 3. (205 aa)
	SMCR8	SMCR8-C9orf72 complex subunit. (932 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMBRA1	ULK1	ENSPSIP00000007005	ENSPSIP00000009949	Autophagy and beclin 1 regulator 1.	Unc-51 like autophagy activating kinase 1.	0.975
ATG2A	ULK1	ENSPSIP00000010531	ENSPSIP00000009949	Autophagy related 2A.	Unc-51 like autophagy activating kinase 1.	0.801
ATG2A	WIPI1	ENSPSIP00000010531	ENSPSIP00000010820	Autophagy related 2A.	WD repeat domain, phosphoinositide interacting 1.	0.836
BAG3	HSPB8	ENSPSIP00000017222	ENSPSIP00000014963	BCL2 associated athanogene 3.	Heat shock protein family B (small) member 8; Belongs to the small heat shock protein (HSP20) family.	0.918
BAG3	TSC1	ENSPSIP00000017222	ENSPSIP00000011446	BCL2 associated athanogene 3.	TSC complex subunit 1.	0.614
BNIP3	PINK1	ENSPSIP00000018197	ENSPSIP00000005635	BCL2 interacting protein 3.	PTEN induced kinase 1.	0.587
BNIP3	SIRT1	ENSPSIP00000018197	ENSPSIP00000006811	BCL2 interacting protein 3.	Deacetylase sirtuin-type domain-containing protein.	0.434
BNIP3	WIPI1	ENSPSIP00000018197	ENSPSIP00000010820	BCL2 interacting protein 3.	WD repeat domain, phosphoinositide interacting 1.	0.494
C9orf72	HTT	ENSPSIP00000017037	ENSPSIP00000016925	C9orf72-SMCR8 complex subunit.	Huntingtin.	0.422
C9orf72	SMCR8	ENSPSIP00000017037	ENSPSIP00000019345	C9orf72-SMCR8 complex subunit.	SMCR8-C9orf72 complex subunit.	0.990
C9orf72	ULK1	ENSPSIP00000017037	ENSPSIP00000009949	C9orf72-SMCR8 complex subunit.	Unc-51 like autophagy activating kinase 1.	0.955
FYCO1	K7FNI3_PELSI	ENSPSIP00000009635	ENSPSIP00000009593	RUN domain-containing protein.	Uncharacterized protein.	0.933
HSPB8	BAG3	ENSPSIP00000014963	ENSPSIP00000017222	Heat shock protein family B (small) member 8; Belongs to the small heat shock protein (HSP20) family.	BCL2 associated athanogene 3.	0.918
HSPB8	TSC1	ENSPSIP00000014963	ENSPSIP00000011446	Heat shock protein family B (small) member 8; Belongs to the small heat shock protein (HSP20) family.	TSC complex subunit 1.	0.612
HTT	C9orf72	ENSPSIP00000016925	ENSPSIP00000017037	Huntingtin.	C9orf72-SMCR8 complex subunit.	0.422
K7FN03_PELSI	NOD1	ENSPSIP00000009413	ENSPSIP00000013395	Protein kinase domain-containing protein.	Nucleotide binding oligomerization domain containing 1.	0.866
K7FNI3_PELSI	FYCO1	ENSPSIP00000009593	ENSPSIP00000009635	Uncharacterized protein.	RUN domain-containing protein.	0.933
K7GBN9_PELSI	WDR24	ENSPSIP00000017700	ENSPSIP00000014856	Uncharacterized protein.	WD repeat domain 24.	0.658
NOD1	K7FN03_PELSI	ENSPSIP00000013395	ENSPSIP00000009413	Nucleotide binding oligomerization domain containing 1.	Protein kinase domain-containing protein.	0.866
NOD1	RIPK2	ENSPSIP00000013395	ENSPSIP00000010794	Nucleotide binding oligomerization domain containing 1.	Receptor interacting serine/threonine kinase 2.	0.986