102 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OTUD1	OTU deubiquitinase 1. (200 aa)
	SENP8	SUMO peptidase family member, NEDD8 specific. (212 aa)
	K7F1R3_PELSI	Uncharacterized protein. (353 aa)
	LRRC69	Leucine rich repeat containing 69. (130 aa)
	OTUD6B	OTU domain containing 6B. (272 aa)
	USP45	Ubiquitin carboxyl-terminal hydrolase. (823 aa)
	USP24	Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family. (2515 aa)
	MYSM1	Myb like, SWIRM and MPN domains 1. (759 aa)
	USP38	Ubiquitin carboxyl-terminal hydrolase. (858 aa)
	SENP7	SUMO specific peptidase 7. (995 aa)
	USP35	Ubiquitin carboxyl-terminal hydrolase. (993 aa)
	PSMD14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	JOSD1	Josephin domain containing 1. (202 aa)
	EIF3F	Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (320 aa)
	USP48	Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family. (924 aa)
	USP21	Ubiquitin carboxyl-terminal hydrolase. (672 aa)
	USP15	Ubiquitin carboxyl-terminal hydrolase. (984 aa)
	COX20	Cytochrome c oxidase assembly factor COX20. (119 aa)
	DESI2	Desumoylating isopeptidase 2. (185 aa)
	USP20	Ubiquitin carboxyl-terminal hydrolase. (909 aa)
	OTUD4	OTU deubiquitinase 4. (1138 aa)
	USP3	Ubiquitin carboxyl-terminal hydrolase. (435 aa)
	STAMBPL1	STAM binding protein like 1. (447 aa)
	USP39	Ubiquitin specific peptidase 39. (296 aa)
	USP30	Ubiquitin carboxyl-terminal hydrolase. (489 aa)
	STAMBP	STAM binding protein. (439 aa)
	USP25	Ubiquitin carboxyl-terminal hydrolase. (663 aa)
	LOC102444137	Uncharacterized protein. (198 aa)
	MINDY4B	DUF4205 domain-containing protein. (108 aa)
	USP9X	USP domain-containing protein; Belongs to the peptidase C19 family. (2555 aa)
	ZUP1	C2H2-type domain-containing protein. (390 aa)
	USPL1	Ubiquitin specific peptidase like 1. (1078 aa)
	USP14	Ubiquitin carboxyl-terminal hydrolase. (480 aa)
	UFSP1	UFM1 specific peptidase 1 (inactive). (261 aa)
	OTUB1	OTU deubiquitinase, ubiquitin aldehyde binding 1. (264 aa)
	ATG4A	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (387 aa)
	DESI1	Desumoylating isopeptidase 1. (240 aa)
	CYLD	CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. (886 aa)
	K7FNK9_PELSI	ULP_PROTEASE domain-containing protein. (458 aa)
	UCHL5	Ubiquitin carboxyl-terminal hydrolase. (304 aa)
	USP49	Ubiquitin carboxyl-terminal hydrolase. (698 aa)
	OTUD7B	OTU deubiquitinase 7B. (890 aa)
	USP28	Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family. (1126 aa)
	USP37	Ubiquitin carboxyl-terminal hydrolase. (989 aa)
	ZC3H12A	Zinc finger CCCH-type containing 12A. (573 aa)
	LOC102458553	Uncharacterized protein; Belongs to the peptidase C19 family. (788 aa)
	COPS6	COP9 signalosome subunit 6. (302 aa)
	USP7	Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. (1106 aa)
	PSMD7	Proteasome 26S subunit, non-ATPase 7. (323 aa)
	MINDY2	MINDY lysine 48 deubiquitinase 2. (448 aa)
	ZRANB1	Uncharacterized protein. (477 aa)
	USP31	Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family. (1131 aa)
	USP13	Ubiquitin carboxyl-terminal hydrolase. (862 aa)
	OTUD3	OTU deubiquitinase 3. (294 aa)
	MINDY1	MINDY lysine 48 deubiquitinase 1. (512 aa)
	USP40	Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. (1244 aa)
	OTULINL	OTU deubiquitinase with linear linkage specificity like. (342 aa)
	BAP1	BRCA1 associated protein 1. (688 aa)
	USP32	Uncharacterized protein; Belongs to the peptidase C19 family. (1566 aa)
	USP12	Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family. (364 aa)
	OTULIN	OTU deubiquitinase with linear linkage specificity. (306 aa)
	ATG4B	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (392 aa)
	USP53	Ubiquitin specific peptidase 53. (1063 aa)
	USP33	Ubiquitin carboxyl-terminal hydrolase. (913 aa)
	USP2	USP domain-containing protein; Belongs to the peptidase C19 family. (311 aa)
	MINDY3	MINDY lysine 48 deubiquitinase 3. (350 aa)
	VCPIP1	Valosin containing protein interacting protein 1. (1207 aa)
	SENP1	SUMO specific peptidase 1. (652 aa)
	BRCC3	BRCA1/BRCA2-containing complex subunit 3. (207 aa)
	SENP6	SUMO specific peptidase 6. (1130 aa)
	USP42	Ubiquitin specific peptidase 42; Belongs to the peptidase C19 family. (1309 aa)
	EIF3H	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (348 aa)
	USP47	Uncharacterized protein. (816 aa)
	USP5	Ubiquitin carboxyl-terminal hydrolase. (857 aa)
	LOC102448690	USP domain-containing protein; Belongs to the peptidase C19 family. (369 aa)
	MINDY4	MINDY lysine 48 deubiquitinase 4. (779 aa)
	UCHL1	Ubiquitin carboxyl-terminal hydrolase. (224 aa)
	UFSP2	UFM1 specific peptidase 2. (476 aa)
	USP4	Ubiquitin carboxyl-terminal hydrolase. (971 aa)
	COPS5	COP9 signalosome subunit 5. (337 aa)
	USP34	Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. (3551 aa)
	OTUD7A	OTU deubiquitinase 7A. (934 aa)
	LOC102459020	DUF862 domain-containing protein. (196 aa)
	ATXN3	Josephin domain-containing protein. (301 aa)
	USP18	USP domain-containing protein; Belongs to the peptidase C19 family. (364 aa)
	MPND	MPN domain containing. (474 aa)
	JOSD2	Josephin domain containing 2. (140 aa)
	TNFAIP3	TNF alpha induced protein 3. (789 aa)
	CEP112	Centrosomal protein 112. (952 aa)
	USP22	Ubiquitin carboxyl-terminal hydrolase. (494 aa)
	USP54	Ubiquitin specific peptidase 54. (1695 aa)
	UCHL3	Ubiquitin carboxyl-terminal hydrolase. (245 aa)
	USP10	Ubiquitin specific peptidase 10; Belongs to the peptidase C19 family. (531 aa)
	USP44	Ubiquitinyl hydrolase 1. (578 aa)
	COPS4	COP9 signalosome subunit 4. (355 aa)
	USP1	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family. (668 aa)
	USP46	Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family. (367 aa)
	USP16	Ubiquitin carboxyl-terminal hydrolase 16; Specifically deubiquitinates 'Lys-120' of histone H2A (H2AK119Ub), a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Deubiquitination of histone H2A is a prerequisite for subsequent phosphorylation at 'Ser-11' of histone H3 (H3S10ph), and is required for chromosome segregation when cells enter into mitosis. Regulates Hox gene expression via histone H2A deubiquitination. Prefers nucleosomal substrates. Does not deubiquitinate histone H2B. (828 aa)
	SENP5	SUMO specific peptidase 5. (774 aa)
	USP50	Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family. (318 aa)
	USP8	Uncharacterized protein; Belongs to the peptidase C19 family. (861 aa)
	SENP2	SUMO specific peptidase 2. (555 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG4A	ATG4B	ENSPSIP00000009235	ENSPSIP00000012313	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.915
ATG4B	ATG4A	ENSPSIP00000012313	ENSPSIP00000009235	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.915
ATXN3	JOSD1	ENSPSIP00000016762	ENSPSIP00000004578	Josephin domain-containing protein.	Josephin domain containing 1.	0.614
ATXN3	JOSD2	ENSPSIP00000016762	ENSPSIP00000017337	Josephin domain-containing protein.	Josephin domain containing 2.	0.782
ATXN3	MYSM1	ENSPSIP00000016762	ENSPSIP00000004076	Josephin domain-containing protein.	Myb like, SWIRM and MPN domains 1.	0.671
ATXN3	PSMD7	ENSPSIP00000016762	ENSPSIP00000010426	Josephin domain-containing protein.	Proteasome 26S subunit, non-ATPase 7.	0.520
ATXN3	USP14	ENSPSIP00000016762	ENSPSIP00000008680	Josephin domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.564
ATXN3	USP32	ENSPSIP00000016762	ENSPSIP00000012154	Josephin domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.570
ATXN3	USP7	ENSPSIP00000016762	ENSPSIP00000010355	Josephin domain-containing protein.	Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.	0.476
BAP1	BRCC3	ENSPSIP00000012139	ENSPSIP00000014806	BRCA1 associated protein 1.	BRCA1/BRCA2-containing complex subunit 3.	0.821
BAP1	COPS5	ENSPSIP00000012139	ENSPSIP00000016177	BRCA1 associated protein 1.	COP9 signalosome subunit 5.	0.674
BAP1	COPS6	ENSPSIP00000012139	ENSPSIP00000010297	BRCA1 associated protein 1.	COP9 signalosome subunit 6.	0.547
BAP1	EIF3F	ENSPSIP00000012139	ENSPSIP00000004741	BRCA1 associated protein 1.	Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.593
BAP1	MPND	ENSPSIP00000012139	ENSPSIP00000017068	BRCA1 associated protein 1.	MPN domain containing.	0.748
BAP1	MYSM1	ENSPSIP00000012139	ENSPSIP00000004076	BRCA1 associated protein 1.	Myb like, SWIRM and MPN domains 1.	0.825
BAP1	PSMD14	ENSPSIP00000012139	ENSPSIP00000004574	BRCA1 associated protein 1.	Proteasome 26S subunit, non-ATPase 14.	0.959
BAP1	PSMD7	ENSPSIP00000012139	ENSPSIP00000010426	BRCA1 associated protein 1.	Proteasome 26S subunit, non-ATPase 7.	0.951
BAP1	STAMBP	ENSPSIP00000012139	ENSPSIP00000007331	BRCA1 associated protein 1.	STAM binding protein.	0.618
BAP1	STAMBPL1	ENSPSIP00000012139	ENSPSIP00000006754	BRCA1 associated protein 1.	STAM binding protein like 1.	0.618
BAP1	USP14	ENSPSIP00000012139	ENSPSIP00000008680	BRCA1 associated protein 1.	Ubiquitin carboxyl-terminal hydrolase.	0.923