STRINGSTRING
HEATR5A HEATR5A RAB9A RAB9A LOC102453320 LOC102453320 TLR2 TLR2 LOC102457570 LOC102457570 SLC18A3 SLC18A3 CDC42EP2 CDC42EP2 ARF6 ARF6 RAB9B RAB9B PIP4P2 PIP4P2 LMBRD1 LMBRD1 RAB5B RAB5B RIN1 RIN1 VPS11 VPS11 RAB7B RAB7B CDC42EP4 CDC42EP4 RAB14 RAB14 OCRL OCRL PIKFYVE PIKFYVE CTLA4 CTLA4 DPP4 DPP4 K7FBX3_PELSI K7FBX3_PELSI INPP5B INPP5B CLTCL1 CLTCL1 GAPVD1 GAPVD1 K7FCY5_PELSI K7FCY5_PELSI EHD1 EHD1 CD2AP CD2AP RAPGEF2 RAPGEF2 LOC102463148 LOC102463148 SH3KBP1 SH3KBP1 RAB8B RAB8B AMBRA1 AMBRA1 RABGEF1 RABGEF1 RIN3 RIN3 APPL1 APPL1 RAB5A RAB5A MTOR MTOR AP2S1 AP2S1 RABEP1 RABEP1 SYT11 SYT11 RAB8A RAB8A STX8 STX8 SGIP1 SGIP1 RAB31 RAB31 CLTC CLTC STX6 STX6 VPS9D1 VPS9D1 K7FRF1_PELSI K7FRF1_PELSI SCARB2 SCARB2 FFAR4 FFAR4 ZYX ZYX RAB22A RAB22A RAB15 RAB15 RAB11B RAB11B K7FTK9_PELSI K7FTK9_PELSI LPAR1 LPAR1 ATG14 ATG14 ANXA3 ANXA3 RAB39A RAB39A RAB11FIP3 RAB11FIP3 RAB7A RAB7A VAMP7 VAMP7 UVRAG UVRAG RAB11A RAB11A NOD1 NOD1 IGF2R IGF2R RAB11FIP4 RAB11FIP4 MYO6 MYO6 SYK SYK PIK3C3 PIK3C3 TYRP1 TYRP1 LOC102444442 LOC102444442 TLR6 TLR6 K7G218_PELSI K7G218_PELSI K7G241_PELSI K7G241_PELSI ANXA11 ANXA11 LOC102463951 LOC102463951 VAMP8 VAMP8 RILP RILP RIN2 RIN2 LAMP1 LAMP1 RAB32 RAB32 STX12 STX12 TIRAP TIRAP RAB11FIP5 RAB11FIP5 AP2A2 AP2A2 STX7 STX7 AMN AMN RAB11FIP1 RAB11FIP1 LPAR2 LPAR2 RAB5C RAB5C AP2M1 AP2M1 SYT7 SYT7 RAB20 RAB20 RAB23 RAB23 RAB38 RAB38 VPS26B VPS26B VAMP3 VAMP3 STXBP4 STXBP4 APPL2 APPL2 TRIM14 TRIM14 INPP5F INPP5F EHD4 EHD4 RAB17 RAB17 PIP4P1 PIP4P1 STXBP3 STXBP3 DCT DCT ECPAS ECPAS RAB35 RAB35 LAMP2 LAMP2 STAM2 STAM2 EHD3 EHD3 K7GIL3_PELSI K7GIL3_PELSI RAB10 RAB10 HEATR5B HEATR5B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HEATR5AHEAT repeat containing 5A. (2046 aa)
RAB9ARAB9A, member RAS oncogene family. (201 aa)
LOC102453320G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (276 aa)
TLR2TIR domain-containing protein; Belongs to the Toll-like receptor family. (783 aa)
LOC102457570TIR domain-containing protein; Belongs to the Toll-like receptor family. (783 aa)
SLC18A3Solute carrier family 18 member A3. (509 aa)
CDC42EP2CDC42 effector protein 2. (237 aa)
ARF6ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
RAB9BRAB9B, member RAS oncogene family. (201 aa)
PIP4P2Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (222 aa)
LMBRD1LMBR1 domain containing 1. (540 aa)
RAB5BRAB5B, member RAS oncogene family. (217 aa)
RIN1Ras and Rab interactor 1. (568 aa)
VPS11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (877 aa)
RAB7BRAB7B, member RAS oncogene family. (200 aa)
CDC42EP4CDC42 effector protein 4. (330 aa)
RAB14RAB14, member RAS oncogene family. (215 aa)
OCRLOCRL inositol polyphosphate-5-phosphatase. (716 aa)
PIKFYVEPhosphoinositide kinase, FYVE-type zinc finger containing. (1498 aa)
CTLA4Cytotoxic T-lymphocyte associated protein 4. (223 aa)
DPP4Uncharacterized protein; Belongs to the peptidase S9B family. (760 aa)
K7FBX3_PELSIUncharacterized protein. (98 aa)
INPP5BInositol polyphosphate-5-phosphatase B. (862 aa)
CLTCL1Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1670 aa)
GAPVD1GTPase activating protein and VPS9 domains 1. (1461 aa)
K7FCY5_PELSIUncharacterized protein. (161 aa)
EHD1EH domain containing 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (534 aa)
CD2APCD2 associated protein. (596 aa)
RAPGEF2Rap guanine nucleotide exchange factor 2. (1644 aa)
LOC102463148Uncharacterized protein. (178 aa)
SH3KBP1SH3 domain containing kinase binding protein 1. (613 aa)
RAB8BRAB8B, member RAS oncogene family. (183 aa)
AMBRA1Autophagy and beclin 1 regulator 1. (1301 aa)
RABGEF1Uncharacterized protein. (578 aa)
RIN3Ras and Rab interactor 3. (973 aa)
APPL1Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. (708 aa)
RAB5ARAB5A, member RAS oncogene family. (215 aa)
MTORSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2522 aa)
AP2S1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (122 aa)
RABEP1Rabaptin, RAB GTPase binding effector protein 1. (860 aa)
SYT11Synaptotagmin 11. (373 aa)
RAB8ARAB8A, member RAS oncogene family. (180 aa)
STX8Syntaxin 8. (228 aa)
SGIP1SH3 domain GRB2 like endophilin interacting protein 1. (760 aa)
RAB31RAB31, member RAS oncogene family. (195 aa)
CLTCClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1675 aa)
STX6Syntaxin 6; Belongs to the syntaxin family. (242 aa)
VPS9D1VPS9 domain containing 1. (577 aa)
K7FRF1_PELSIUncharacterized protein. (141 aa)
SCARB2Scavenger receptor class B member 2; Belongs to the CD36 family. (421 aa)
FFAR4Free fatty acid receptor 4. (352 aa)
ZYXZyxin. (594 aa)
RAB22ARAB22A, member RAS oncogene family. (194 aa)
RAB15RAB15, member RAS oncogene family. (178 aa)
RAB11BUncharacterized protein. (257 aa)
K7FTK9_PELSIUncharacterized protein. (223 aa)
LPAR1Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family. (369 aa)
ATG14Autophagy related 14. (393 aa)
ANXA3Annexin. (323 aa)
RAB39ARAB39A, member RAS oncogene family. (213 aa)
RAB11FIP3RAB11 family interacting protein 3. (524 aa)
RAB7ARAB7A, member RAS oncogene family. (207 aa)
VAMP7Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
UVRAGUV radiation resistance associated. (659 aa)
RAB11ARAB11A, member RAS oncogene family. (236 aa)
NOD1Nucleotide binding oligomerization domain containing 1. (950 aa)
IGF2RInsulin like growth factor 2 receptor. (2448 aa)
RAB11FIP4RAB11 family interacting protein 4. (496 aa)
MYO6Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1284 aa)
SYKTyrosine-protein kinase. (445 aa)
PIK3C3Phosphatidylinositol 3-kinase catalytic subunit type 3. (864 aa)
TYRP1Tyrosinase related protein 1. (535 aa)
LOC102444442Uncharacterized protein. (252 aa)
TLR6Toll-like receptor. (653 aa)
K7G218_PELSITIR domain-containing protein; Belongs to the Toll-like receptor family. (1043 aa)
K7G241_PELSIUncharacterized protein. (239 aa)
ANXA11Annexin. (509 aa)
LOC102463951Uncharacterized protein. (216 aa)
VAMP8Vesicle associated membrane protein 8. (103 aa)
RILPRH2 domain-containing protein. (69 aa)
RIN2Ras and Rab interactor 2. (891 aa)
LAMP1Lysosomal associated membrane protein 1. (397 aa)
RAB32RAB32, member RAS oncogene family. (218 aa)
STX12Syntaxin 12; Belongs to the syntaxin family. (265 aa)
TIRAPTIR domain containing adaptor protein. (232 aa)
RAB11FIP5RAB11 family interacting protein 5. (542 aa)
AP2A2AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (946 aa)
STX7Syntaxin 7; Belongs to the syntaxin family. (258 aa)
AMNAmnion associated transmembrane protein. (481 aa)
RAB11FIP1RAB11 family interacting protein 1. (1205 aa)
LPAR2Lysophosphatidic acid receptor 2; Belongs to the G-protein coupled receptor 1 family. (263 aa)
RAB5CUncharacterized protein. (216 aa)
AP2M1AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (433 aa)
SYT7Synaptotagmin 7. (674 aa)
RAB20RAB20, member RAS oncogene family. (234 aa)
RAB23RAB23, member RAS oncogene family. (237 aa)
RAB38RAB38, member RAS oncogene family. (212 aa)
VPS26BVPS26, retromer complex component B. (336 aa)
VAMP3Vesicle associated membrane protein 3. (98 aa)
STXBP4Syntaxin binding protein 4. (742 aa)
APPL2Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. (643 aa)
TRIM14Tripartite motif containing 14. (377 aa)
INPP5FInositol polyphosphate-5-phosphatase F. (1101 aa)
EHD4EH domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (490 aa)
RAB17RAB17, member RAS oncogene family. (237 aa)
PIP4P1Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (109 aa)
STXBP3Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (639 aa)
DCTDopachrome tautomerase. (525 aa)
ECPASEcm29 proteasome adaptor and scaffold. (1688 aa)
RAB35Uncharacterized protein. (193 aa)
LAMP2Lysosomal associated membrane protein 2. (480 aa)
STAM2Signal transducing adaptor molecule 2. (473 aa)
EHD3EH domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
K7GIL3_PELSIUncharacterized protein. (797 aa)
RAB10RAB10, member RAS oncogene family. (137 aa)
HEATR5BUncharacterized protein. (1285 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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