10 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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co-expression

protein homology

Your Input:
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	URM1	Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically [...] (101 aa)
	UBL5	Uncharacterized protein. (47 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (140 aa)
	SUMO1	Small ubiquitin-related modifier. (101 aa)
	SUMO4	Small ubiquitin-related modifier. (95 aa)
	UBC	Uncharacterized protein. (355 aa)
	K7EXK2_PELSI	Ubiquitin-like domain-containing protein. (32 aa)
	ATG12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (143 aa)
	SUMO3	Small ubiquitin-related modifier. (88 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG12	UBL5	ENSPSIP00000019454	ENSPSIP00000015041	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Uncharacterized protein.	0.401
ATG12	URM1	ENSPSIP00000019454	ENSPSIP00000016203	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically [...]	0.543
K7EXK2_PELSI	RPS27A	ENSPSIP00000000512	ENSPSIP00000014184	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.988
K7EXK2_PELSI	SUMO1	ENSPSIP00000000512	ENSPSIP00000012821	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.623
K7EXK2_PELSI	SUMO3	ENSPSIP00000000512	ENSPSIP00000018102	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.634
K7EXK2_PELSI	SUMO4	ENSPSIP00000000512	ENSPSIP00000006876	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.634
K7EXK2_PELSI	UBC	ENSPSIP00000000512	ENSPSIP00000003340	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.949
RPS27A	K7EXK2_PELSI	ENSPSIP00000014184	ENSPSIP00000000512	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.988
RPS27A	SUMO1	ENSPSIP00000014184	ENSPSIP00000012821	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.657
RPS27A	SUMO3	ENSPSIP00000014184	ENSPSIP00000018102	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.687
RPS27A	SUMO4	ENSPSIP00000014184	ENSPSIP00000006876	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.687
RPS27A	UBA52	ENSPSIP00000014184	ENSPSIP00000012408	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
RPS27A	UBC	ENSPSIP00000014184	ENSPSIP00000003340	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.999
SUMO1	K7EXK2_PELSI	ENSPSIP00000012821	ENSPSIP00000000512	Small ubiquitin-related modifier.	Ubiquitin-like domain-containing protein.	0.623
SUMO1	RPS27A	ENSPSIP00000012821	ENSPSIP00000014184	Small ubiquitin-related modifier.	Ubiquitin-like domain-containing protein.	0.657
SUMO1	SUMO3	ENSPSIP00000012821	ENSPSIP00000018102	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.966
SUMO1	SUMO4	ENSPSIP00000012821	ENSPSIP00000006876	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.966
SUMO1	UBA52	ENSPSIP00000012821	ENSPSIP00000012408	Small ubiquitin-related modifier.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.623
SUMO1	UBC	ENSPSIP00000012821	ENSPSIP00000003340	Small ubiquitin-related modifier.	Uncharacterized protein.	0.701
SUMO3	K7EXK2_PELSI	ENSPSIP00000018102	ENSPSIP00000000512	Small ubiquitin-related modifier.	Ubiquitin-like domain-containing protein.	0.634