89 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TMEM165	GDT1 family protein. (205 aa)
	TMEM163	Transmembrane protein 163. (268 aa)
	TMEM184A	Transmembrane protein 184A. (446 aa)
	SYNDIG1	Synapse differentiation inducing 1. (128 aa)
	INPP4A	Inositol polyphosphate-4-phosphatase type I A. (934 aa)
	VTI1B	Vesicle transport through interaction with t-SNAREs 1B. (234 aa)
	NEU3	Neuraminidase 3. (428 aa)
	MMGT1	Membrane magnesium transporter 1. (101 aa)
	SNX8	Sorting nexin 8. (425 aa)
	GGA1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (660 aa)
	LDLRAD4	Low density lipoprotein receptor class A domain containing 4. (212 aa)
	STEAP4	STEAP4 metalloreductase. (472 aa)
	NSG2	Neuronal vesicle trafficking associated 2. (183 aa)
	K7FVD2_PELSI	WD_REPEATS_REGION domain-containing protein. (350 aa)
	SNX19	Sorting nexin 19. (977 aa)
	SNX30	Sorting nexin family member 30. (468 aa)
	NAPEPLD	N-acyl phosphatidylethanolamine phospholipase D. (401 aa)
	DNAJC13	DnaJ heat shock protein family (Hsp40) member C13. (2245 aa)
	SORCS2	Sortilin related VPS10 domain containing receptor 2. (958 aa)
	TPCN1	Two pore segment channel 1. (764 aa)
	CLIP3	CAP-Gly domain containing linker protein 3. (532 aa)
	CLCN3	Chloride channel protein. (839 aa)
	VAMP8	Vesicle associated membrane protein 8. (103 aa)
	GPNMB	Glycoprotein nmb. (637 aa)
	STX12	Syntaxin 12; Belongs to the syntaxin family. (265 aa)
	WDR91	WD repeat domain 91. (722 aa)
	STX7	Syntaxin 7; Belongs to the syntaxin family. (258 aa)
	CLVS1	Clavesin 1. (332 aa)
	RAB5C	Uncharacterized protein. (216 aa)
	PLA2G4B	Phospholipase A2. (796 aa)
	CD274	CD274 molecule. (294 aa)
	FAM151B	FYVE-type domain-containing protein. (1801 aa)
	DAGLA	Diacylglycerol lipase alpha. (1047 aa)
	PI4K2B	Phosphatidylinositol 4-kinase type 2 beta. (474 aa)
	ZFYVE28	Zinc finger FYVE-type containing 28. (897 aa)
	K7GC54_PELSI	Uncharacterized protein. (830 aa)
	NSG1	Neuronal vesicle trafficking associated 1. (185 aa)
	APPL2	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. (643 aa)
	LAMP5	Lysosomal associated membrane protein family member 5. (222 aa)
	MARCHF8	Membrane associated ring-CH-type finger 8. (477 aa)
	CFTR	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1015 aa)
	RAB17	RAB17, member RAS oncogene family. (237 aa)
	STAM	Signal transducing adaptor molecule. (534 aa)
	K7GH00_PELSI	Phospholipase A2. (774 aa)
	VPS41	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (854 aa)
	STAM2	Signal transducing adaptor molecule 2. (473 aa)
	GRIA1	Glutamate ionotropic receptor AMPA type subunit 1. (902 aa)
	LOC102453058	Uncharacterized protein. (771 aa)
	LOC102448586	Phospholipase A2. (809 aa)
	WASHC1	WASH complex subunit 1. (464 aa)
	PMEPA1	Prostate transmembrane protein, androgen induced 1. (150 aa)
	ARC	Activity regulated cytoskeleton associated protein. (405 aa)
	REP15	RAB15 effector protein. (233 aa)
	SORL1	Sortilin related receptor 1. (2124 aa)
	SNX16	Sorting nexin 16. (348 aa)
	TSG101	Tumor susceptibility 101. (385 aa)
	RAB5B	RAB5B, member RAS oncogene family. (217 aa)
	PLPP2	Phospholipid phosphatase 2. (221 aa)
	SNX4	Sorting nexin 4. (441 aa)
	RAB14	RAB14, member RAS oncogene family. (215 aa)
	OCRL	OCRL inositol polyphosphate-5-phosphatase. (716 aa)
	PIKFYVE	Phosphoinositide kinase, FYVE-type zinc finger containing. (1498 aa)
	CMTM6	CKLF like MARVEL transmembrane domain containing 6. (138 aa)
	INPP5B	Inositol polyphosphate-5-phosphatase B. (862 aa)
	MARCHF1	Membrane associated ring-CH-type finger 1. (361 aa)
	PLEKHF2	Pleckstrin homology and FYVE domain containing 2. (249 aa)
	K7FED6_PELSI	PLA2c domain-containing protein. (316 aa)
	K7FEL0_PELSI	PLA2c domain-containing protein. (237 aa)
	PDLIM4	PDZ and LIM domain 4. (299 aa)
	SNX27	Sorting nexin 27. (467 aa)
	MON2	MON2 homolog, regulator of endosome-to-Golgi trafficking. (1664 aa)
	ATP13A3	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1250 aa)
	ZFYVE9	Zinc finger FYVE domain-containing protein. (1419 aa)
	PSEN1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (467 aa)
	LLGL1	LLGL scribble cell polarity complex component 1. (999 aa)
	SNX3	Sorting nexin 3. (162 aa)
	GGA2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (580 aa)
	APPL1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. (708 aa)
	SNX1	Sorting nexin 1. (406 aa)
	RAB5A	RAB5A, member RAS oncogene family. (215 aa)
	SNX12	Sorting nexin 12. (129 aa)
	SLC1A1	Amino acid transporter. (504 aa)
	SNX2	Sorting nexin 2. (484 aa)
	BOK	BCL2 family apoptosis regulator BOK. (216 aa)
	ANXA1	Annexin. (342 aa)
	SNX7	Sorting nexin 7. (442 aa)
	GGA3	Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (757 aa)
	RCC2	Regulator of chromosome condensation 2. (427 aa)
	UBXN6	UBX domain protein 6. (387 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANXA1	TSG101	ENSPSIP00000008251	ENSPSIP00000002704	Annexin.	Tumor susceptibility 101.	0.559
APPL1	APPL2	ENSPSIP00000007726	ENSPSIP00000018146	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	0.995
APPL1	INPP5B	ENSPSIP00000007726	ENSPSIP00000005544	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Inositol polyphosphate-5-phosphatase B.	0.563
APPL1	OCRL	ENSPSIP00000007726	ENSPSIP00000004597	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	OCRL inositol polyphosphate-5-phosphatase.	0.640
APPL1	RAB17	ENSPSIP00000007726	ENSPSIP00000019191	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB17, member RAS oncogene family.	0.870
APPL1	RAB5A	ENSPSIP00000007726	ENSPSIP00000007889	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB5A, member RAS oncogene family.	0.870
APPL1	RAB5B	ENSPSIP00000007726	ENSPSIP00000003195	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB5B, member RAS oncogene family.	0.870
APPL1	RAB5C	ENSPSIP00000007726	ENSPSIP00000016824	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Uncharacterized protein.	0.870
APPL2	APPL1	ENSPSIP00000018146	ENSPSIP00000007726	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	0.995
APPL2	RAB17	ENSPSIP00000018146	ENSPSIP00000019191	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	RAB17, member RAS oncogene family.	0.870
APPL2	RAB5A	ENSPSIP00000018146	ENSPSIP00000007889	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	RAB5A, member RAS oncogene family.	0.870
APPL2	RAB5B	ENSPSIP00000018146	ENSPSIP00000003195	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	RAB5B, member RAS oncogene family.	0.870
APPL2	RAB5C	ENSPSIP00000018146	ENSPSIP00000016824	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	Uncharacterized protein.	0.870
ARC	GRIA1	ENSPSIP00000000098	ENSPSIP00000019759	Activity regulated cytoskeleton associated protein.	Glutamate ionotropic receptor AMPA type subunit 1.	0.445
CD274	CMTM6	ENSPSIP00000016973	ENSPSIP00000005017	CD274 molecule.	CKLF like MARVEL transmembrane domain containing 6.	0.437
CFTR	VAMP8	ENSPSIP00000018968	ENSPSIP00000014943	Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer.	Vesicle associated membrane protein 8.	0.534
CMTM6	CD274	ENSPSIP00000005017	ENSPSIP00000016973	CKLF like MARVEL transmembrane domain containing 6.	CD274 molecule.	0.437
DAGLA	NAPEPLD	ENSPSIP00000017409	ENSPSIP00000012472	Diacylglycerol lipase alpha.	N-acyl phosphatidylethanolamine phospholipase D.	0.562
DNAJC13	SNX1	ENSPSIP00000012606	ENSPSIP00000007835	DnaJ heat shock protein family (Hsp40) member C13.	Sorting nexin 1.	0.602
DNAJC13	SNX2	ENSPSIP00000012606	ENSPSIP00000008137	DnaJ heat shock protein family (Hsp40) member C13.	Sorting nexin 2.	0.532