55 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ZYX	Zyxin. (594 aa)
	RAB22A	RAB22A, member RAS oncogene family. (194 aa)
	RAB11B	Uncharacterized protein. (257 aa)
	ATG14	Autophagy related 14. (393 aa)
	ANXA3	Annexin. (323 aa)
	RAB39A	RAB39A, member RAS oncogene family. (213 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	VAMP7	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
	UVRAG	UV radiation resistance associated. (659 aa)
	RAB11A	RAB11A, member RAS oncogene family. (236 aa)
	NOD1	Nucleotide binding oligomerization domain containing 1. (950 aa)
	SYK	Tyrosine-protein kinase. (445 aa)
	PIK3C3	Phosphatidylinositol 3-kinase catalytic subunit type 3. (864 aa)
	TLR6	Toll-like receptor. (653 aa)
	K7G218_PELSI	TIR domain-containing protein; Belongs to the Toll-like receptor family. (1043 aa)
	ANXA11	Annexin. (509 aa)
	LOC102463951	Uncharacterized protein. (216 aa)
	VAMP8	Vesicle associated membrane protein 8. (103 aa)
	RILP	RH2 domain-containing protein. (69 aa)
	LAMP1	Lysosomal associated membrane protein 1. (397 aa)
	RAB32	RAB32, member RAS oncogene family. (218 aa)
	RAB11FIP5	RAB11 family interacting protein 5. (542 aa)
	RAB11FIP1	RAB11 family interacting protein 1. (1205 aa)
	SYT7	Synaptotagmin 7. (674 aa)
	RAB20	RAB20, member RAS oncogene family. (234 aa)
	RAB23	RAB23, member RAS oncogene family. (237 aa)
	RAB38	RAB38, member RAS oncogene family. (212 aa)
	VPS26B	VPS26, retromer complex component B. (336 aa)
	VAMP3	Vesicle associated membrane protein 3. (98 aa)
	STXBP4	Syntaxin binding protein 4. (742 aa)
	APPL2	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. (643 aa)
	TRIM14	Tripartite motif containing 14. (377 aa)
	PIP4P1	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (109 aa)
	STXBP3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (639 aa)
	LAMP2	Lysosomal associated membrane protein 2. (480 aa)
	RAB9A	RAB9A, member RAS oncogene family. (201 aa)
	TLR2	TIR domain-containing protein; Belongs to the Toll-like receptor family. (783 aa)
	LOC102457570	TIR domain-containing protein; Belongs to the Toll-like receptor family. (783 aa)
	CDC42EP2	CDC42 effector protein 2. (237 aa)
	RAB9B	RAB9B, member RAS oncogene family. (201 aa)
	PIP4P2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (222 aa)
	RAB7B	RAB7B, member RAS oncogene family. (200 aa)
	CDC42EP4	CDC42 effector protein 4. (330 aa)
	RAB14	RAB14, member RAS oncogene family. (215 aa)
	OCRL	OCRL inositol polyphosphate-5-phosphatase. (716 aa)
	PIKFYVE	Phosphoinositide kinase, FYVE-type zinc finger containing. (1498 aa)
	INPP5B	Inositol polyphosphate-5-phosphatase B. (862 aa)
	AMBRA1	Autophagy and beclin 1 regulator 1. (1301 aa)
	APPL1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. (708 aa)
	MTOR	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2522 aa)
	SYT11	Synaptotagmin 11. (373 aa)
	STX8	Syntaxin 8. (228 aa)
	RAB31	RAB31, member RAS oncogene family. (195 aa)
	STX6	Syntaxin 6; Belongs to the syntaxin family. (242 aa)
	K7FRF1_PELSI	Uncharacterized protein. (141 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMBRA1	ATG14	ENSPSIP00000007005	ENSPSIP00000012051	Autophagy and beclin 1 regulator 1.	Autophagy related 14.	0.800
AMBRA1	PIK3C3	ENSPSIP00000007005	ENSPSIP00000013847	Autophagy and beclin 1 regulator 1.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.852
AMBRA1	UVRAG	ENSPSIP00000007005	ENSPSIP00000013253	Autophagy and beclin 1 regulator 1.	UV radiation resistance associated.	0.669
APPL1	APPL2	ENSPSIP00000007726	ENSPSIP00000018146	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	0.995
APPL1	INPP5B	ENSPSIP00000007726	ENSPSIP00000005544	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Inositol polyphosphate-5-phosphatase B.	0.563
APPL1	LOC102463951	ENSPSIP00000007726	ENSPSIP00000014671	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Uncharacterized protein.	0.534
APPL1	OCRL	ENSPSIP00000007726	ENSPSIP00000004597	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	OCRL inositol polyphosphate-5-phosphatase.	0.640
APPL1	RAB11A	ENSPSIP00000007726	ENSPSIP00000013288	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB11A, member RAS oncogene family.	0.534
APPL1	RAB11B	ENSPSIP00000007726	ENSPSIP00000011337	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Uncharacterized protein.	0.534
APPL1	RAB20	ENSPSIP00000007726	ENSPSIP00000017255	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB20, member RAS oncogene family.	0.870
APPL1	RAB22A	ENSPSIP00000007726	ENSPSIP00000010974	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB22A, member RAS oncogene family.	0.870
APPL1	RAB31	ENSPSIP00000007726	ENSPSIP00000010047	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB31, member RAS oncogene family.	0.870
APPL2	APPL1	ENSPSIP00000018146	ENSPSIP00000007726	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	0.995
APPL2	LOC102463951	ENSPSIP00000018146	ENSPSIP00000014671	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	Uncharacterized protein.	0.534
APPL2	RAB11A	ENSPSIP00000018146	ENSPSIP00000013288	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	RAB11A, member RAS oncogene family.	0.534
APPL2	RAB11B	ENSPSIP00000018146	ENSPSIP00000011337	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	Uncharacterized protein.	0.534
APPL2	RAB20	ENSPSIP00000018146	ENSPSIP00000017255	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	RAB20, member RAS oncogene family.	0.870
APPL2	RAB22A	ENSPSIP00000018146	ENSPSIP00000010974	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	RAB22A, member RAS oncogene family.	0.870
APPL2	RAB31	ENSPSIP00000018146	ENSPSIP00000010047	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	RAB31, member RAS oncogene family.	0.870
ATG14	AMBRA1	ENSPSIP00000012051	ENSPSIP00000007005	Autophagy related 14.	Autophagy and beclin 1 regulator 1.	0.800