STRINGSTRING
AREG AREG PTCH1 PTCH1 VEGFC VEGFC SKI SKI LRP5 LRP5 NOCT NOCT FGF23 FGF23 TNFAIP6 TNFAIP6 HAND2 HAND2 TWIST2 TWIST2 TNN TNN IGFBP5 IGFBP5 CRIM1 CRIM1 SEMA4D SEMA4D UCMA UCMA ID3 ID3 K7GG22_PELSI K7GG22_PELSI GREM1 GREM1 BAMBI BAMBI TMEM64 TMEM64 K7EZ94_PELSI K7EZ94_PELSI MEN1 MEN1 TNF TNF OSTN OSTN NBR1 NBR1 RANBP3L RANBP3L RORB RORB FNDC3B FNDC3B TWSG1 TWSG1 LOC102462376 LOC102462376
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AREGAmphiregulin. (212 aa)
PTCH1Patched 1. (1442 aa)
VEGFCVascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. (367 aa)
SKISKI proto-oncogene. (712 aa)
LRP5Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1582 aa)
NOCTNocturnin. (495 aa)
FGF23Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family. (250 aa)
TNFAIP6TNF alpha induced protein 6. (275 aa)
HAND2Heart and neural crest derivatives expressed 2. (205 aa)
TWIST2Twist family bHLH transcription factor 2. (160 aa)
TNNTenascin N. (1298 aa)
IGFBP5Insulin like growth factor binding protein 5. (109 aa)
CRIM1Cysteine rich transmembrane BMP regulator 1. (1036 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (857 aa)
UCMAUpper zone of growth plate and cartilage matrix associated. (138 aa)
ID3Inhibitor of DNA binding 3, HLH protein. (125 aa)
K7GG22_PELSIUncharacterized protein. (866 aa)
GREM1Gremlin. (182 aa)
BAMBIBMP and activin membrane bound inhibitor. (242 aa)
TMEM64Uncharacterized protein. (106 aa)
K7EZ94_PELSIUncharacterized protein. (110 aa)
MEN1Menin 1. (605 aa)
TNFTumor necrosis factor. (229 aa)
OSTNOsteocrin. (134 aa)
NBR1NBR1 autophagy cargo receptor. (995 aa)
RANBP3LRAN binding protein 3 like. (407 aa)
RORBRAR related orphan receptor B. (470 aa)
FNDC3BFibronectin type III domain containing 3B. (1211 aa)
TWSG1Twisted gastrulation BMP signaling modulator 1. (206 aa)
LOC102462376Uncharacterized protein; Belongs to the semaphorin family. (720 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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