STRINGSTRING
LOC102462376 LOC102462376 EFNA5 EFNA5 SEMA4D SEMA4D IST1 IST1 WNT3 WNT3 RND2 RND2 CRABP2 CRABP2 WNT3A WNT3A BDNF BDNF NGF NGF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102462376Uncharacterized protein; Belongs to the semaphorin family. (720 aa)
EFNA5Ephrin A5; Belongs to the ephrin family. (191 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (857 aa)
IST1IST1 factor associated with ESCRT-III. (378 aa)
WNT3Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (356 aa)
RND2Rho family GTPase 2. (211 aa)
CRABP2Cellular retinoic acid-binding protein 1; Cytosolic CRABPs may regulate the access of retinoic acid to the nuclear retinoic acid receptors. (138 aa)
WNT3AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (241 aa)
BDNFBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (246 aa)
NGFNerve growth factor; Belongs to the NGF-beta family. (242 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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