STRINGSTRING
OTUD7B OTUD7B USP28 USP28 USP37 USP37 ZC3H12A ZC3H12A LOC102458553 LOC102458553 COPS6 COPS6 USP7 USP7 LOC102463045 LOC102463045 MINDY2 MINDY2 ABRAXAS2 ABRAXAS2 ZRANB1 ZRANB1 USP31 USP31 USP13 USP13 OTUD3 OTUD3 MINDY1 MINDY1 COPS2 COPS2 USP40 USP40 OTULINL OTULINL BAP1 BAP1 USP32 USP32 USP12 USP12 OTULIN OTULIN USP53 USP53 USP33 USP33 USP2 USP2 TADA1 TADA1 ATXN7L2 ATXN7L2 MINDY3 MINDY3 VCPIP1 VCPIP1 SENP1 SENP1 TAF4 TAF4 BRCC3 BRCC3 SENP6 SENP6 USP42 USP42 SUPT3H SUPT3H USP47 USP47 USP5 USP5 LOC102448690 LOC102448690 MINDY4 MINDY4 UCHL1 UCHL1 TAF2 TAF2 USP4 USP4 BABAM1 BABAM1 COPS5 COPS5 USP34 USP34 OTUD7A OTUD7A LOC102459020 LOC102459020 ATXN3 ATXN3 USP18 USP18 COPS7A COPS7A K7GAB9_PELSI K7GAB9_PELSI JOSD2 JOSD2 TNFAIP3 TNFAIP3 USP22 USP22 USP54 USP54 ABRAXAS1 ABRAXAS1 COPS3 COPS3 UCHL3 UCHL3 USP10 USP10 USP44 USP44 COPS4 COPS4 USP1 USP1 TAF6 TAF6 USP46 USP46 USP16 USP16 COPS8 COPS8 SENP5 SENP5 USP50 USP50 USP8 USP8 SENP2 SENP2 SPATA2 SPATA2 USP24 USP24 ATXN7 ATXN7 TADA3 TADA3 TAF5L TAF5L USP45 USP45 OTUD6B OTUD6B SF3B3 SF3B3 K7F1R3_PELSI K7F1R3_PELSI SENP8 SENP8 OTUD1 OTUD1 SF3B5 SF3B5 MYSM1 MYSM1 USP38 USP38 TRRAP TRRAP SENP7 SENP7 SUPT7L SUPT7L USP35 USP35 PSMD14 PSMD14 JOSD1 JOSD1 EIF3F EIF3F ATXN7L1 ATXN7L1 USP48 USP48 TAF5 TAF5 USP21 USP21 USP15 USP15 DESI2 DESI2 TAF6L TAF6L USP20 USP20 TAF12 TAF12 OTUD4 OTUD4 USP3 USP3 STAMBPL1 STAMBPL1 USP39 USP39 USP30 USP30 ATXN7L3 ATXN7L3 STAMBP STAMBP COPS7B COPS7B ENY2 ENY2 USP25 USP25 MINDY4B MINDY4B USP9X USP9X USPL1 USPL1 USP14 USP14 OTUB1 OTUB1 TAF10 TAF10 GPS1 GPS1 DESI1 DESI1 CYLD CYLD K7FNK9_PELSI K7FNK9_PELSI UCHL5 UCHL5 USP49 USP49
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OTUD7BOTU deubiquitinase 7B. (890 aa)
USP28Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family. (1126 aa)
USP37Ubiquitin carboxyl-terminal hydrolase. (989 aa)
ZC3H12AZinc finger CCCH-type containing 12A. (573 aa)
LOC102458553Uncharacterized protein; Belongs to the peptidase C19 family. (788 aa)
COPS6COP9 signalosome subunit 6. (302 aa)
USP7Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. (1106 aa)
LOC102463045TAF4 domain-containing protein. (174 aa)
MINDY2MINDY lysine 48 deubiquitinase 2. (448 aa)
ABRAXAS2Abraxas 2, BRISC complex subunit. (302 aa)
ZRANB1Uncharacterized protein. (477 aa)
USP31Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family. (1131 aa)
USP13Ubiquitin carboxyl-terminal hydrolase. (862 aa)
OTUD3OTU deubiquitinase 3. (294 aa)
MINDY1MINDY lysine 48 deubiquitinase 1. (512 aa)
COPS2COP9 signalosome subunit 2. (443 aa)
USP40Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. (1244 aa)
OTULINLOTU deubiquitinase with linear linkage specificity like. (342 aa)
BAP1BRCA1 associated protein 1. (688 aa)
USP32Uncharacterized protein; Belongs to the peptidase C19 family. (1566 aa)
USP12Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family. (364 aa)
OTULINOTU deubiquitinase with linear linkage specificity. (306 aa)
USP53Ubiquitin specific peptidase 53. (1063 aa)
USP33Ubiquitin carboxyl-terminal hydrolase. (913 aa)
USP2USP domain-containing protein; Belongs to the peptidase C19 family. (311 aa)
TADA1Transcriptional adaptor 1. (348 aa)
ATXN7L2Ataxin 7 like 2. (514 aa)
MINDY3MINDY lysine 48 deubiquitinase 3. (350 aa)
VCPIP1Valosin containing protein interacting protein 1. (1207 aa)
SENP1SUMO specific peptidase 1. (652 aa)
TAF4TATA-box binding protein associated factor 4. (1101 aa)
BRCC3BRCA1/BRCA2-containing complex subunit 3. (207 aa)
SENP6SUMO specific peptidase 6. (1130 aa)
USP42Ubiquitin specific peptidase 42; Belongs to the peptidase C19 family. (1309 aa)
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (380 aa)
USP47Uncharacterized protein. (816 aa)
USP5Ubiquitin carboxyl-terminal hydrolase. (857 aa)
LOC102448690USP domain-containing protein; Belongs to the peptidase C19 family. (369 aa)
MINDY4MINDY lysine 48 deubiquitinase 4. (779 aa)
UCHL1Ubiquitin carboxyl-terminal hydrolase. (224 aa)
TAF2TATA-box binding protein associated factor 2. (1200 aa)
USP4Ubiquitin carboxyl-terminal hydrolase. (971 aa)
BABAM1Uncharacterized protein. (224 aa)
COPS5COP9 signalosome subunit 5. (337 aa)
USP34Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. (3551 aa)
OTUD7AOTU deubiquitinase 7A. (934 aa)
LOC102459020DUF862 domain-containing protein. (196 aa)
ATXN3Josephin domain-containing protein. (301 aa)
USP18USP domain-containing protein; Belongs to the peptidase C19 family. (364 aa)
COPS7ACOP9 signalosome subunit 7A. (236 aa)
K7GAB9_PELSITAFH domain-containing protein. (848 aa)
JOSD2Josephin domain containing 2. (140 aa)
TNFAIP3TNF alpha induced protein 3. (789 aa)
USP22Ubiquitin carboxyl-terminal hydrolase. (494 aa)
USP54Ubiquitin specific peptidase 54. (1695 aa)
ABRAXAS1Abraxas 1, BRCA1 A complex subunit. (382 aa)
COPS3COP9 signalosome subunit 3. (423 aa)
UCHL3Ubiquitin carboxyl-terminal hydrolase. (245 aa)
USP10Ubiquitin specific peptidase 10; Belongs to the peptidase C19 family. (531 aa)
USP44Ubiquitinyl hydrolase 1. (578 aa)
COPS4COP9 signalosome subunit 4. (355 aa)
USP1Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family. (668 aa)
TAF6TATA-box binding protein associated factor 6. (424 aa)
USP46Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family. (367 aa)
USP16Ubiquitin carboxyl-terminal hydrolase 16; Specifically deubiquitinates 'Lys-120' of histone H2A (H2AK119Ub), a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Deubiquitination of histone H2A is a prerequisite for subsequent phosphorylation at 'Ser-11' of histone H3 (H3S10ph), and is required for chromosome segregation when cells enter into mitosis. Regulates Hox gene expression via histone H2A deubiquitination. Prefers nucleosomal substrates. Does not deubiquitinate histone H2B. (828 aa)
COPS8COP9 signalosome subunit 8. (185 aa)
SENP5SUMO specific peptidase 5. (774 aa)
USP50Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family. (318 aa)
USP8Uncharacterized protein; Belongs to the peptidase C19 family. (861 aa)
SENP2SUMO specific peptidase 2. (555 aa)
SPATA2Spermatogenesis associated 2. (529 aa)
USP24Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family. (2515 aa)
ATXN7SCA7 domain-containing protein. (724 aa)
TADA3Transcriptional adaptor 3. (349 aa)
TAF5LTATA-box binding protein associated factor 5 like. (585 aa)
USP45Ubiquitin carboxyl-terminal hydrolase. (823 aa)
OTUD6BOTU domain containing 6B. (272 aa)
SF3B3Splicing factor 3b subunit 3. (1087 aa)
K7F1R3_PELSIUncharacterized protein. (353 aa)
SENP8SUMO peptidase family member, NEDD8 specific. (212 aa)
OTUD1OTU deubiquitinase 1. (200 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
MYSM1Myb like, SWIRM and MPN domains 1. (759 aa)
USP38Ubiquitin carboxyl-terminal hydrolase. (858 aa)
TRRAPTransformation/transcription domain associated protein. (2458 aa)
SENP7SUMO specific peptidase 7. (995 aa)
SUPT7LSPT7 like, STAGA complex gamma subunit. (413 aa)
USP35Ubiquitin carboxyl-terminal hydrolase. (993 aa)
PSMD14Proteasome 26S subunit, non-ATPase 14. (310 aa)
JOSD1Josephin domain containing 1. (202 aa)
EIF3FEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (320 aa)
ATXN7L1Ataxin 7 like 1. (884 aa)
USP48Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family. (924 aa)
TAF5TATA-box binding protein associated factor 5. (554 aa)
USP21Ubiquitin carboxyl-terminal hydrolase. (672 aa)
USP15Ubiquitin carboxyl-terminal hydrolase. (984 aa)
DESI2Desumoylating isopeptidase 2. (185 aa)
TAF6LTATA-box binding protein associated factor 6 like. (627 aa)
USP20Ubiquitin carboxyl-terminal hydrolase. (909 aa)
TAF12TATA-box binding protein associated factor 12. (161 aa)
OTUD4OTU deubiquitinase 4. (1138 aa)
USP3Ubiquitin carboxyl-terminal hydrolase. (435 aa)
STAMBPL1STAM binding protein like 1. (447 aa)
USP39Ubiquitin specific peptidase 39. (296 aa)
USP30Ubiquitin carboxyl-terminal hydrolase. (489 aa)
ATXN7L3Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (337 aa)
STAMBPSTAM binding protein. (439 aa)
COPS7BCOP9 signalosome subunit 7B. (264 aa)
ENY2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (99 aa)
USP25Ubiquitin carboxyl-terminal hydrolase. (663 aa)
MINDY4BDUF4205 domain-containing protein. (108 aa)
USP9XUSP domain-containing protein; Belongs to the peptidase C19 family. (2555 aa)
USPL1Ubiquitin specific peptidase like 1. (1078 aa)
USP14Ubiquitin carboxyl-terminal hydrolase. (480 aa)
OTUB1OTU deubiquitinase, ubiquitin aldehyde binding 1. (264 aa)
TAF10TATA-box binding protein associated factor 10. (124 aa)
GPS1G protein pathway suppressor 1. (527 aa)
DESI1Desumoylating isopeptidase 1. (240 aa)
CYLDCYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. (886 aa)
K7FNK9_PELSIULP_PROTEASE domain-containing protein. (458 aa)
UCHL5Ubiquitin carboxyl-terminal hydrolase. (304 aa)
USP49Ubiquitin carboxyl-terminal hydrolase. (698 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.