(50 nodes) Postsynapse organization network (Pelodiscus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CNKSR2	Connector enhancer of kinase suppressor of Ras 2. (1023 aa)
	LRRTM4	Leucine rich repeat transmembrane neuronal 4. (527 aa)
	K7F217_PELSI	Uncharacterized protein. (855 aa)
	WASF2	WASP family member 2. (496 aa)
	DLG2	Discs large MAGUK scaffold protein 2. (634 aa)
	K7F5V5_PELSI	Uncharacterized protein. (1013 aa)
	RELN	Uncharacterized protein. (2100 aa)
	K7F7A9_PELSI	Uncharacterized protein. (1108 aa)
	K7F7G4_PELSI	Reelin domain-containing protein. (177 aa)
	ITGA3	Integrin subunit alpha 3; Belongs to the integrin alpha chain family. (943 aa)
	TANC1	Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1. (1863 aa)
	EPHB1	Receptor protein-tyrosine kinase. (984 aa)
	NLGN4X	COesterase domain-containing protein. (835 aa)
	K7FAF2_PELSI	ANK_REP_REGION domain-containing protein. (338 aa)
	SHANK2	SAM domain-containing protein. (1171 aa)
	LOC102452665	DHR-2 domain-containing protein; Belongs to the DOCK family. (1239 aa)
	GDNF	Glial cell derived neurotrophic factor. (218 aa)
	LGMN	Legumain. (411 aa)
	LOC102455828	COesterase domain-containing protein. (553 aa)
	HOMER1	Homer scaffold protein 1. (367 aa)
	K7FME6_PELSI	Uncharacterized protein. (617 aa)
	NLGN1	Neuroligin 1. (608 aa)
	CDC42	Cell division cycle 42. (239 aa)
	LOC102462789	COesterase domain-containing protein. (243 aa)
	TMEM108	Transmembrane protein 108. (443 aa)
	DIP2A	Disco interacting protein 2 homolog A. (1543 aa)
	DBNL	Drebrin like. (411 aa)
	GLRB	Glycine receptor beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (497 aa)
	NLGN2	Neuroligin 2. (862 aa)
	NEFL	Neurofilament light; Belongs to the intermediate filament family. (419 aa)
	ADAM10	ADAM metallopeptidase domain 10. (749 aa)
	ARHGAP39	Rho GTPase activating protein 39. (971 aa)
	DLG3	Discs large MAGUK scaffold protein 3. (366 aa)
	DLG4	Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family. (501 aa)
	FNTA	Farnesyltransferase, CAAX box, alpha. (317 aa)
	PRMT3	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (551 aa)
	K7G225_PELSI	PH domain-containing protein. (507 aa)
	EPHB6	EPH receptor B6. (993 aa)
	PICK1	Protein interacting with PRKCA 1. (407 aa)
	K7G6Z4_PELSI	PID domain-containing protein. (291 aa)
	NTNG2	Netrin G2. (599 aa)
	ITPKA	Kinase; Belongs to the inositol phosphokinase (IPK) family. (441 aa)
	K7GCA4_PELSI	PDZ domain-containing protein. (101 aa)
	LOC102461662	Uncharacterized protein. (448 aa)
	GPHN	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. (729 aa)
	EPHB3	EPH receptor B3. (1041 aa)
	DLG1	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family. (808 aa)
	LOC102457791	Uncharacterized protein. (786 aa)
	COLQ	Collagen like tail subunit of asymmetric acetylcholinesterase. (456 aa)
	ZDHHC12	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (266 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP39	CDC42	ENSPSIP00000012145	ENSPSIP00000009910	Rho GTPase activating protein 39.	Cell division cycle 42.	0.437
CDC42	ARHGAP39	ENSPSIP00000009910	ENSPSIP00000012145	Cell division cycle 42.	Rho GTPase activating protein 39.	0.437
CDC42	K7G225_PELSI	ENSPSIP00000009910	ENSPSIP00000014336	Cell division cycle 42.	PH domain-containing protein.	0.831
CDC42	LOC102452665	ENSPSIP00000009910	ENSPSIP00000006071	Cell division cycle 42.	DHR-2 domain-containing protein; Belongs to the DOCK family.	0.925
CDC42	LOC102457791	ENSPSIP00000009910	ENSPSIP00000020012	Cell division cycle 42.	Uncharacterized protein.	0.437
CDC42	WASF2	ENSPSIP00000009910	ENSPSIP00000002772	Cell division cycle 42.	WASP family member 2.	0.748
DLG1	K7FAF2_PELSI	ENSPSIP00000019999	ENSPSIP00000005012	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.	ANK_REP_REGION domain-containing protein.	0.575
DLG1	K7FME6_PELSI	ENSPSIP00000019999	ENSPSIP00000009206	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.	Uncharacterized protein.	0.575
DLG1	K7GCA4_PELSI	ENSPSIP00000019999	ENSPSIP00000017915	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.	PDZ domain-containing protein.	0.441
DLG1	LOC102461662	ENSPSIP00000019999	ENSPSIP00000017926	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.	Uncharacterized protein.	0.596
DLG1	SHANK2	ENSPSIP00000019999	ENSPSIP00000005965	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.	SAM domain-containing protein.	0.441
DLG2	DLG3	ENSPSIP00000003347	ENSPSIP00000012639	Discs large MAGUK scaffold protein 2.	Discs large MAGUK scaffold protein 3.	0.800
DLG2	K7FAF2_PELSI	ENSPSIP00000003347	ENSPSIP00000005012	Discs large MAGUK scaffold protein 2.	ANK_REP_REGION domain-containing protein.	0.575
DLG2	K7FME6_PELSI	ENSPSIP00000003347	ENSPSIP00000009206	Discs large MAGUK scaffold protein 2.	Uncharacterized protein.	0.575
DLG2	K7GCA4_PELSI	ENSPSIP00000003347	ENSPSIP00000017915	Discs large MAGUK scaffold protein 2.	PDZ domain-containing protein.	0.441
DLG2	LOC102461662	ENSPSIP00000003347	ENSPSIP00000017926	Discs large MAGUK scaffold protein 2.	Uncharacterized protein.	0.596
DLG2	SHANK2	ENSPSIP00000003347	ENSPSIP00000005965	Discs large MAGUK scaffold protein 2.	SAM domain-containing protein.	0.441
DLG3	DLG2	ENSPSIP00000012639	ENSPSIP00000003347	Discs large MAGUK scaffold protein 3.	Discs large MAGUK scaffold protein 2.	0.800
DLG3	K7FAF2_PELSI	ENSPSIP00000012639	ENSPSIP00000005012	Discs large MAGUK scaffold protein 3.	ANK_REP_REGION domain-containing protein.	0.575
DLG3	K7FME6_PELSI	ENSPSIP00000012639	ENSPSIP00000009206	Discs large MAGUK scaffold protein 3.	Uncharacterized protein.	0.575