(17 nodes) Cytosolic large ribosomal subunit network (Pelodiscus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL10	Ribosomal protein L10 like. (164 aa)
	RPL4	Ribosomal protein L4. (359 aa)
	RPL26	Ribosomal protein L26. (163 aa)
	RPL30	Ribosomal protein L30. (108 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (184 aa)
	RPL7	Ribosomal protein L7. (178 aa)
	RPL35A	Uncharacterized protein. (113 aa)
	RPL6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (272 aa)
	RPLP1	Ribosomal protein lateral stalk subunit P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
	RPL31	Uncharacterized protein. (126 aa)
	ZCCHC17	Zinc finger CCHC-type containing 17. (248 aa)
	RPL32	Uncharacterized protein. (135 aa)
	RPL18A	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	RPL9	Ribosomal protein L9. (192 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (205 aa)
	RPL3L	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (406 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL10	RPL15	ENSPSIP00000012172	ENSPSIP00000009523	Ribosomal protein L10 like.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
RPL10	RPL18A	ENSPSIP00000012172	ENSPSIP00000008798	Ribosomal protein L10 like.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
RPL10	RPL19	ENSPSIP00000012172	ENSPSIP00000018541	Ribosomal protein L10 like.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
RPL10	RPL26	ENSPSIP00000012172	ENSPSIP00000014706	Ribosomal protein L10 like.	Ribosomal protein L26.	0.999
RPL10	RPL29	ENSPSIP00000012172	ENSPSIP00000016488	Ribosomal protein L10 like.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
RPL10	RPL30	ENSPSIP00000012172	ENSPSIP00000014918	Ribosomal protein L10 like.	Ribosomal protein L30.	0.999
RPL10	RPL31	ENSPSIP00000012172	ENSPSIP00000007816	Ribosomal protein L10 like.	Uncharacterized protein.	0.999
RPL10	RPL32	ENSPSIP00000012172	ENSPSIP00000008290	Ribosomal protein L10 like.	Uncharacterized protein.	0.999
RPL10	RPL35A	ENSPSIP00000012172	ENSPSIP00000002333	Ribosomal protein L10 like.	Uncharacterized protein.	0.999
RPL10	RPL3L	ENSPSIP00000012172	ENSPSIP00000010209	Ribosomal protein L10 like.	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.	0.992
RPL10	RPL4	ENSPSIP00000012172	ENSPSIP00000012720	Ribosomal protein L10 like.	Ribosomal protein L4.	0.999
RPL10	RPL6	ENSPSIP00000012172	ENSPSIP00000003686	Ribosomal protein L10 like.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
RPL10	RPL7	ENSPSIP00000012172	ENSPSIP00000020574	Ribosomal protein L10 like.	Ribosomal protein L7.	0.998
RPL10	RPL9	ENSPSIP00000012172	ENSPSIP00000009038	Ribosomal protein L10 like.	Ribosomal protein L9.	0.999
RPL10	RPLP1	ENSPSIP00000012172	ENSPSIP00000004295	Ribosomal protein L10 like.	Ribosomal protein lateral stalk subunit P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.998
RPL15	RPL10	ENSPSIP00000009523	ENSPSIP00000012172	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Ribosomal protein L10 like.	0.999
RPL15	RPL18A	ENSPSIP00000009523	ENSPSIP00000008798	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
RPL15	RPL19	ENSPSIP00000009523	ENSPSIP00000018541	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
RPL15	RPL26	ENSPSIP00000009523	ENSPSIP00000014706	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	Ribosomal protein L26.	0.999
RPL15	RPL29	ENSPSIP00000009523	ENSPSIP00000016488	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999