STRINGSTRING
RFC5 RFC5 REV1 REV1 RFC4 RFC4 K7GI78_PELSI K7GI78_PELSI KXD1 KXD1 UBA52 UBA52 RFC1 RFC1 K7EXK2_PELSI K7EXK2_PELSI PCNA PCNA RCBTB1 RCBTB1 UBC UBC REV3L REV3L RPA3 RPA3 MAD2L2 MAD2L2 RFC3 RFC3 RPA1 RPA1 ATAD5 ATAD5 RFC2 RFC2 MEIOB MEIOB RPS27A RPS27A RCBTB2 RCBTB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RFC5Replication factor C subunit 5. (319 aa)
REV1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1270 aa)
RFC4Replication factor C subunit 4. (329 aa)
K7GI78_PELSIHORMA domain-containing protein. (154 aa)
KXD1KxDL motif containing 1. (176 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
RFC1Replication factor C subunit 1. (1146 aa)
K7EXK2_PELSIUbiquitin-like domain-containing protein. (32 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
UBCUncharacterized protein. (355 aa)
REV3LREV3 like, DNA directed polymerase zeta catalytic subunit. (3047 aa)
RPA3Replication protein A3. (119 aa)
MAD2L2HORMA domain-containing protein. (211 aa)
RFC3Replication factor C subunit 3. (304 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (603 aa)
ATAD5ATPase family AAA domain containing 5. (1692 aa)
RFC2Replication factor C subunit 2. (374 aa)
MEIOBMeiosis specific with OB-fold. (467 aa)
RPS27AUbiquitin-like domain-containing protein. (140 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (552 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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