9 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ITCH	E3 ubiquitin-protein ligase. (845 aa)
	WWP1	E3 ubiquitin-protein ligase. (919 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (140 aa)
	K7EXK2_PELSI	Ubiquitin-like domain-containing protein. (32 aa)
	FNDC3A	Fibronectin type III domain containing 3A. (1142 aa)
	UBC	Uncharacterized protein. (355 aa)
	K7FGG7_PELSI	Uncharacterized protein. (738 aa)
	FNDC3B	Fibronectin type III domain containing 3B. (1211 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ITCH	K7EXK2_PELSI	ENSPSIP00000007810	ENSPSIP00000000512	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.761
ITCH	RPS27A	ENSPSIP00000007810	ENSPSIP00000014184	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.931
ITCH	UBA52	ENSPSIP00000007810	ENSPSIP00000012408	E3 ubiquitin-protein ligase.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.865
ITCH	UBC	ENSPSIP00000007810	ENSPSIP00000003340	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.927
ITCH	WWP1	ENSPSIP00000007810	ENSPSIP00000012863	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.976
K7EXK2_PELSI	ITCH	ENSPSIP00000000512	ENSPSIP00000007810	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase.	0.761
K7EXK2_PELSI	RPS27A	ENSPSIP00000000512	ENSPSIP00000014184	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.988
K7EXK2_PELSI	UBC	ENSPSIP00000000512	ENSPSIP00000003340	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.949
K7EXK2_PELSI	WWP1	ENSPSIP00000000512	ENSPSIP00000012863	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase.	0.672
RPS27A	ITCH	ENSPSIP00000014184	ENSPSIP00000007810	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase.	0.931
RPS27A	K7EXK2_PELSI	ENSPSIP00000014184	ENSPSIP00000000512	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.988
RPS27A	UBA52	ENSPSIP00000014184	ENSPSIP00000012408	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
RPS27A	UBC	ENSPSIP00000014184	ENSPSIP00000003340	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.999
RPS27A	WWP1	ENSPSIP00000014184	ENSPSIP00000012863	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase.	0.761
UBA52	ITCH	ENSPSIP00000012408	ENSPSIP00000007810	Ubiquitin A-52 residue ribosomal protein fusion product 1.	E3 ubiquitin-protein ligase.	0.865
UBA52	RPS27A	ENSPSIP00000012408	ENSPSIP00000014184	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin-like domain-containing protein.	0.999
UBA52	UBC	ENSPSIP00000012408	ENSPSIP00000003340	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Uncharacterized protein.	0.999
UBA52	WWP1	ENSPSIP00000012408	ENSPSIP00000012863	Ubiquitin A-52 residue ribosomal protein fusion product 1.	E3 ubiquitin-protein ligase.	0.865
UBC	ITCH	ENSPSIP00000003340	ENSPSIP00000007810	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.927
UBC	K7EXK2_PELSI	ENSPSIP00000003340	ENSPSIP00000000512	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.949