35 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DHX36	DEAH-box helicase 36. (908 aa)
	LOC102444286	Uncharacterized protein. (678 aa)
	NFKB1	Nuclear factor kappa B subunit 1. (993 aa)
	NKIRAS1	NFKB inhibitor interacting Ras like 1. (191 aa)
	MYD88	MYD88 innate immune signal transduction adaptor. (186 aa)
	NKIRAS2	NFKB inhibitor interacting Ras like 2. (191 aa)
	DHX9	DExH-box helicase 9. (1267 aa)
	TREX2	Three prime repair exonuclease 2. (223 aa)
	CHUK	Component of inhibitor of nuclear factor kappa B kinase complex. (716 aa)
	MRE11	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (714 aa)
	IKBKB	Inhibitor of nuclear factor kappa B kinase subunit beta. (714 aa)
	DDX41	DEAD-box helicase 41. (475 aa)
	K7F636_PELSI	MFS domain-containing protein. (345 aa)
	UBC	Uncharacterized protein. (355 aa)
	CTNNB1	Uncharacterized protein. (778 aa)
	NFKBIB	NFKB inhibitor beta. (275 aa)
	LRRFIP1	LRR binding FLII interacting protein 1. (648 aa)
	DHX57	DExH-box helicase 57. (1369 aa)
	NLRC3	NLR family CARD domain containing 3. (1063 aa)
	YTHDC2	YTH domain containing 2. (1367 aa)
	YTHDC1	YTH domain containing 1. (693 aa)
	STING1	Transmembrane protein 173. (379 aa)
	K7G2V4_PELSI	Uncharacterized protein. (114 aa)
	DHX29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1363 aa)
	MFSD1	Major facilitator superfamily domain containing 1. (396 aa)
	KXD1	KxDL motif containing 1. (176 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	TRIM56	Tripartite motif containing 56. (585 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (140 aa)
	LRRFIP2	LRR binding FLII interacting protein 2. (670 aa)
	NFKBIA	ANK_REP_REGION domain-containing protein. (238 aa)
	DHX30	DExH-box helicase 30. (1153 aa)
	IKBKG	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (585 aa)
	K7EXK2_PELSI	Ubiquitin-like domain-containing protein. (32 aa)
	TRIM32	Tripartite motif containing 32. (647 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHUK	CTNNB1	ENSPSIP00000006591	ENSPSIP00000002285	Component of inhibitor of nuclear factor kappa B kinase complex.	Uncharacterized protein.	0.419
CHUK	IKBKB	ENSPSIP00000006591	ENSPSIP00000005754	Component of inhibitor of nuclear factor kappa B kinase complex.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.999
CHUK	IKBKG	ENSPSIP00000006591	ENSPSIP00000013019	Component of inhibitor of nuclear factor kappa B kinase complex.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.974
CHUK	K7EXK2_PELSI	ENSPSIP00000006591	ENSPSIP00000000512	Component of inhibitor of nuclear factor kappa B kinase complex.	Ubiquitin-like domain-containing protein.	0.523
CHUK	MYD88	ENSPSIP00000006591	ENSPSIP00000008979	Component of inhibitor of nuclear factor kappa B kinase complex.	MYD88 innate immune signal transduction adaptor.	0.704
CHUK	NFKB1	ENSPSIP00000006591	ENSPSIP00000009626	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor kappa B subunit 1.	0.985
CHUK	NFKBIA	ENSPSIP00000006591	ENSPSIP00000010380	Component of inhibitor of nuclear factor kappa B kinase complex.	ANK_REP_REGION domain-containing protein.	0.998
CHUK	NFKBIB	ENSPSIP00000006591	ENSPSIP00000002515	Component of inhibitor of nuclear factor kappa B kinase complex.	NFKB inhibitor beta.	0.881
CHUK	RPS27A	ENSPSIP00000006591	ENSPSIP00000014184	Component of inhibitor of nuclear factor kappa B kinase complex.	Ubiquitin-like domain-containing protein.	0.635
CHUK	STING1	ENSPSIP00000006591	ENSPSIP00000014972	Component of inhibitor of nuclear factor kappa B kinase complex.	Transmembrane protein 173.	0.792
CHUK	UBA52	ENSPSIP00000006591	ENSPSIP00000012408	Component of inhibitor of nuclear factor kappa B kinase complex.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.659
CHUK	UBC	ENSPSIP00000006591	ENSPSIP00000003340	Component of inhibitor of nuclear factor kappa B kinase complex.	Uncharacterized protein.	0.613
CTNNB1	CHUK	ENSPSIP00000002285	ENSPSIP00000006591	Uncharacterized protein.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.419
CTNNB1	IKBKB	ENSPSIP00000002285	ENSPSIP00000005754	Uncharacterized protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.476
CTNNB1	K7EXK2_PELSI	ENSPSIP00000002285	ENSPSIP00000000512	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.442
CTNNB1	LRRFIP1	ENSPSIP00000002285	ENSPSIP00000019004	Uncharacterized protein.	LRR binding FLII interacting protein 1.	0.444
CTNNB1	LRRFIP2	ENSPSIP00000002285	ENSPSIP00000013107	Uncharacterized protein.	LRR binding FLII interacting protein 2.	0.444
CTNNB1	NFKB1	ENSPSIP00000002285	ENSPSIP00000009626	Uncharacterized protein.	Nuclear factor kappa B subunit 1.	0.614
CTNNB1	RPS27A	ENSPSIP00000002285	ENSPSIP00000014184	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.583
CTNNB1	UBA52	ENSPSIP00000002285	ENSPSIP00000012408	Uncharacterized protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.442