13 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NGF	Nerve growth factor; Belongs to the NGF-beta family. (242 aa)
	UBC	Uncharacterized protein. (355 aa)
	NGFR	Nerve growth factor receptor. (309 aa)
	PSEN1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (467 aa)
	PSENEN	Uncharacterized protein. (81 aa)
	LOC102463836	Uncharacterized protein. (237 aa)
	SQSTM1	Sequestosome 1. (437 aa)
	ITGB3BP	Integrin subunit beta 3 binding protein. (195 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (547 aa)
	APH1A	Aph-1 homolog A, gamma-secretase subunit. (106 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (140 aa)
	NCSTN	Nicastrin. (701 aa)
	PSEN2	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (387 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APH1A	LOC102463836	ENSPSIP00000012964	ENSPSIP00000010685	Aph-1 homolog A, gamma-secretase subunit.	Uncharacterized protein.	0.901
APH1A	NCSTN	ENSPSIP00000012964	ENSPSIP00000019342	Aph-1 homolog A, gamma-secretase subunit.	Nicastrin.	0.992
APH1A	PSEN1	ENSPSIP00000012964	ENSPSIP00000007093	Aph-1 homolog A, gamma-secretase subunit.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.976
APH1A	PSEN2	ENSPSIP00000012964	ENSPSIP00000019543	Aph-1 homolog A, gamma-secretase subunit.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.976
APH1A	PSENEN	ENSPSIP00000012964	ENSPSIP00000008922	Aph-1 homolog A, gamma-secretase subunit.	Uncharacterized protein.	0.991
ITGB3BP	SQSTM1	ENSPSIP00000011698	ENSPSIP00000010714	Integrin subunit beta 3 binding protein.	Sequestosome 1.	0.615
LOC102463836	APH1A	ENSPSIP00000010685	ENSPSIP00000012964	Uncharacterized protein.	Aph-1 homolog A, gamma-secretase subunit.	0.901
LOC102463836	NCSTN	ENSPSIP00000010685	ENSPSIP00000019342	Uncharacterized protein.	Nicastrin.	0.992
LOC102463836	PSEN1	ENSPSIP00000010685	ENSPSIP00000007093	Uncharacterized protein.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.976
LOC102463836	PSEN2	ENSPSIP00000010685	ENSPSIP00000019543	Uncharacterized protein.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.976
LOC102463836	PSENEN	ENSPSIP00000010685	ENSPSIP00000008922	Uncharacterized protein.	Uncharacterized protein.	0.991
NCSTN	APH1A	ENSPSIP00000019342	ENSPSIP00000012964	Nicastrin.	Aph-1 homolog A, gamma-secretase subunit.	0.992
NCSTN	LOC102463836	ENSPSIP00000019342	ENSPSIP00000010685	Nicastrin.	Uncharacterized protein.	0.992
NCSTN	PSEN1	ENSPSIP00000019342	ENSPSIP00000007093	Nicastrin.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.999
NCSTN	PSEN2	ENSPSIP00000019342	ENSPSIP00000019543	Nicastrin.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.999
NCSTN	PSENEN	ENSPSIP00000019342	ENSPSIP00000008922	Nicastrin.	Uncharacterized protein.	0.999
NGF	NGFR	ENSPSIP00000001223	ENSPSIP00000004829	Nerve growth factor; Belongs to the NGF-beta family.	Nerve growth factor receptor.	0.542
NGFR	NGF	ENSPSIP00000004829	ENSPSIP00000001223	Nerve growth factor receptor.	Nerve growth factor; Belongs to the NGF-beta family.	0.542
PSEN1	APH1A	ENSPSIP00000007093	ENSPSIP00000012964	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Aph-1 homolog A, gamma-secretase subunit.	0.976
PSEN1	LOC102463836	ENSPSIP00000007093	ENSPSIP00000010685	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	Uncharacterized protein.	0.976