STRINGSTRING
K7FN03_PELSI K7FN03_PELSI RPS27A RPS27A TRAF6 TRAF6 RIPK2 RIPK2 SQSTM1 SQSTM1 MYD88 MYD88 IKBKB IKBKB NGFR NGFR UBC UBC NGF NGF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
K7FN03_PELSIProtein kinase domain-containing protein. (449 aa)
RPS27AUbiquitin-like domain-containing protein. (140 aa)
TRAF6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (547 aa)
RIPK2Receptor interacting serine/threonine kinase 2. (562 aa)
SQSTM1Sequestosome 1. (437 aa)
MYD88MYD88 innate immune signal transduction adaptor. (186 aa)
IKBKBInhibitor of nuclear factor kappa B kinase subunit beta. (714 aa)
NGFRNerve growth factor receptor. (309 aa)
UBCUncharacterized protein. (355 aa)
NGFNerve growth factor; Belongs to the NGF-beta family. (242 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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