33 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K7FBD5_PELSI	Uncharacterized protein. (119 aa)
	K7FBC7_PELSI	Uncharacterized protein. (209 aa)
	K7FB82_PELSI	Uncharacterized protein. (133 aa)
	CYP2J19	Uncharacterized protein; Belongs to the cytochrome P450 family. (499 aa)
	K7FAG8_PELSI	Uncharacterized protein; Belongs to the cytochrome P450 family. (547 aa)
	LOC102460160	Uncharacterized protein; Belongs to the cytochrome P450 family. (522 aa)
	K7G4D0_PELSI	Uncharacterized protein; Belongs to the cytochrome P450 family. (491 aa)
	LOC102458597	Uncharacterized protein; Belongs to the cytochrome P450 family. (494 aa)
	K7G3S1_PELSI	Uncharacterized protein. (498 aa)
	K7G0D6_PELSI	Uncharacterized protein; Belongs to the cytochrome P450 family. (504 aa)
	K7G035_PELSI	Uncharacterized protein. (350 aa)
	ARNT2	Aryl hydrocarbon receptor nuclear translocator 2. (725 aa)
	AHR	Uncharacterized protein. (831 aa)
	LOC102462176	Uncharacterized protein; Belongs to the cytochrome P450 family. (507 aa)
	LOC102447714	Uncharacterized protein. (522 aa)
	K7FR97_PELSI	Uncharacterized protein; Belongs to the cytochrome P450 family. (463 aa)
	K7FP12_PELSI	Uncharacterized protein; Belongs to the cytochrome P450 family. (495 aa)
	LOC102447293	Uncharacterized protein. (510 aa)
	K7FN89_PELSI	Uncharacterized protein. (164 aa)
	ARNT	Aryl hydrocarbon receptor nuclear translocator. (793 aa)
	K7FLX9_PELSI	Uncharacterized protein. (217 aa)
	LOC102459847	Uncharacterized protein; Belongs to the cytochrome P450 family. (494 aa)
	LOC102446167	Uncharacterized protein; Belongs to the cytochrome P450 family. (276 aa)
	LOC102455640	Uncharacterized protein; Belongs to the cytochrome P450 family. (530 aa)
	LOC102457583	Uncharacterized protein; Belongs to the cytochrome P450 family. (494 aa)
	AHRR	Uncharacterized protein. (549 aa)
	K7FI64_PELSI	Uncharacterized protein. (180 aa)
	LOC102455397	Uncharacterized protein; Belongs to the cytochrome P450 family. (631 aa)
	K7FBW5_PELSI	Uncharacterized protein; Belongs to the cytochrome P450 family. (488 aa)
	K7GJN0_PELSI	Uncharacterized protein. (581 aa)
	LOC102448631	Uncharacterized protein. (294 aa)
	K7GFK2_PELSI	Uncharacterized protein. (401 aa)
	K7GC00_PELSI	Uncharacterized protein; Belongs to the cytochrome P450 family. (479 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHR	ARNT	ENSPSIP00000011268	ENSPSIP00000009433	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.893
AHR	ARNT2	ENSPSIP00000011268	ENSPSIP00000011844	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.928
AHRR	ARNT	ENSPSIP00000007799	ENSPSIP00000009433	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.664
AHRR	ARNT2	ENSPSIP00000007799	ENSPSIP00000011844	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.664
AHRR	K7FI64_PELSI	ENSPSIP00000007799	ENSPSIP00000007724	Uncharacterized protein.	Uncharacterized protein.	0.886
ARNT	AHR	ENSPSIP00000009433	ENSPSIP00000011268	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.893
ARNT	AHRR	ENSPSIP00000009433	ENSPSIP00000007799	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.664
ARNT	K7FI64_PELSI	ENSPSIP00000009433	ENSPSIP00000007724	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.664
ARNT	K7GJN0_PELSI	ENSPSIP00000009433	ENSPSIP00000020491	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.893
ARNT2	AHR	ENSPSIP00000011844	ENSPSIP00000011268	Aryl hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.928
ARNT2	AHRR	ENSPSIP00000011844	ENSPSIP00000007799	Aryl hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.664
ARNT2	K7FI64_PELSI	ENSPSIP00000011844	ENSPSIP00000007724	Aryl hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.664
ARNT2	K7GJN0_PELSI	ENSPSIP00000011844	ENSPSIP00000020491	Aryl hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.893
K7FI64_PELSI	AHRR	ENSPSIP00000007724	ENSPSIP00000007799	Uncharacterized protein.	Uncharacterized protein.	0.886
K7FI64_PELSI	ARNT	ENSPSIP00000007724	ENSPSIP00000009433	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.664
K7FI64_PELSI	ARNT2	ENSPSIP00000007724	ENSPSIP00000011844	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.664
K7FR97_PELSI	LOC102447293	ENSPSIP00000010557	ENSPSIP00000009585	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.443
K7FR97_PELSI	LOC102447714	ENSPSIP00000010557	ENSPSIP00000010937	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.444
K7GJN0_PELSI	ARNT	ENSPSIP00000020491	ENSPSIP00000009433	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.893
K7GJN0_PELSI	ARNT2	ENSPSIP00000020491	ENSPSIP00000011844	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.893