STRINGSTRING
K7EXK2_PELSI K7EXK2_PELSI OTUD1 OTUD1 UBC UBC TRADD TRADD USP21 USP21 IKBKB IKBKB TRAF1 TRAF1 CHUK CHUK TNFSF10 TNFSF10 CYLD CYLD K7FQ52_PELSI K7FQ52_PELSI LOC102458553 LOC102458553 LOC102448753 LOC102448753 RIPK1 RIPK1 UBA52 UBA52 TAB1 TAB1 USP2 USP2 RPS27A RPS27A TAB3 TAB3 BIRC7 BIRC7 TRAF2 TRAF2 XIAP XIAP TNFAIP3 TNFAIP3 OPTN OPTN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
K7EXK2_PELSIUbiquitin-like domain-containing protein. (32 aa)
OTUD1OTU deubiquitinase 1. (200 aa)
UBCUncharacterized protein. (355 aa)
TRADDTNFRSF1A associated via death domain. (304 aa)
USP21Ubiquitin carboxyl-terminal hydrolase. (672 aa)
IKBKBInhibitor of nuclear factor kappa B kinase subunit beta. (714 aa)
TRAF1TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (561 aa)
CHUKComponent of inhibitor of nuclear factor kappa B kinase complex. (716 aa)
TNFSF10TNF superfamily member 10; Belongs to the tumor necrosis factor family. (309 aa)
CYLDCYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. (886 aa)
K7FQ52_PELSIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (448 aa)
LOC102458553Uncharacterized protein; Belongs to the peptidase C19 family. (788 aa)
LOC102448753Uncharacterized protein. (611 aa)
RIPK1Receptor interacting serine/threonine kinase 1. (716 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
TAB1TGF-beta activated kinase 1 (MAP3K7) binding protein 1. (563 aa)
USP2USP domain-containing protein; Belongs to the peptidase C19 family. (311 aa)
RPS27AUbiquitin-like domain-containing protein. (140 aa)
TAB3TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (706 aa)
BIRC7Baculoviral IAP repeat containing 7. (352 aa)
TRAF2TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (511 aa)
XIAPX-linked inhibitor of apoptosis. (497 aa)
TNFAIP3TNF alpha induced protein 3. (789 aa)
OPTNOptineurin. (560 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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