50 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CUL1	Cullin 1; Belongs to the cullin family. (776 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	PSMC1	Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family. (439 aa)
	PSMA1	Proteasome endopeptidase complex. (236 aa)
	PSMC2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (437 aa)
	PRKACA	Uncharacterized protein; Belongs to the protein kinase superfamily. (340 aa)
	PSMC6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (288 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (140 aa)
	CSNK1A1	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily. (364 aa)
	PSMA5	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (237 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	PSMD13	Proteasome 26S subunit, non-ATPase 13. (365 aa)
	PRKACB	Uncharacterized protein; Belongs to the protein kinase superfamily. (398 aa)
	K7FGV8_PELSI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (336 aa)
	PSMD12	Proteasome 26S subunit, non-ATPase 12. (420 aa)
	PSMD5	Proteasome 26S subunit, non-ATPase 5. (453 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (230 aa)
	PSME4	Proteasome activator subunit 4. (1837 aa)
	PSMB7	Proteasome subunit beta. (277 aa)
	PSMD8	Proteasome 26S subunit, non-ATPase 8. (244 aa)
	SKP1	S-phase kinase associated protein 1; Belongs to the SKP1 family. (163 aa)
	RBX1	Ring-box 1. (120 aa)
	PSMC5	Proteasome 26S subunit, ATPase 5. (228 aa)
	PSMD14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	PSMC3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (426 aa)
	SUFU	SUFU negative regulator of hedgehog signaling. (426 aa)
	PSMB6	Proteasome subunit beta 6. (228 aa)
	PSMD11	Proteasome 26S subunit, non-ATPase 11. (393 aa)
	UBC	Uncharacterized protein. (355 aa)
	PSMD6	Proteasome 26S subunit, non-ATPase 6. (371 aa)
	PSMA8	Proteasome endopeptidase complex. (194 aa)
	K7F3C8_PELSI	Proteasome subunit alpha type. (245 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (809 aa)
	K7EXK2_PELSI	Ubiquitin-like domain-containing protein. (32 aa)
	PSMB2	Proteasome subunit beta. (171 aa)
	PSMD3	Proteasome 26S subunit, non-ATPase 3. (461 aa)
	PSMB3	Proteasome subunit beta. (204 aa)
	PSMD7	Proteasome 26S subunit, non-ATPase 7. (323 aa)
	GSK3B	Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily. (419 aa)
	PSMA6	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (246 aa)
	PSMD10	Proteasome 26S subunit, non-ATPase 10. (190 aa)
	PSMA4	Proteasome subunit alpha type. (262 aa)
	BTRC	Beta-transducin repeat containing E3 ubiquitin protein ligase. (594 aa)
	PSMD4	Proteasome 26S subunit, non-ATPase 4. (378 aa)
	PSMA2	Proteasome endopeptidase complex. (156 aa)
	GLI3	GLI family zinc finger 3. (1575 aa)
	PSMF1	PI31_Prot_C domain-containing protein. (174 aa)
	PSMA7	Proteasome endopeptidase complex. (220 aa)
	PSMC4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (406 aa)
	PSMD9	PDZ domain-containing protein. (166 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTRC	CSNK1A1	ENSPSIP00000008119	ENSPSIP00000013702	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	0.549
BTRC	CUL1	ENSPSIP00000008119	ENSPSIP00000017614	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Cullin 1; Belongs to the cullin family.	0.999
BTRC	GLI3	ENSPSIP00000008119	ENSPSIP00000020145	Beta-transducin repeat containing E3 ubiquitin protein ligase.	GLI family zinc finger 3.	0.960
BTRC	GSK3B	ENSPSIP00000008119	ENSPSIP00000010018	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily.	0.835
BTRC	K7EXK2_PELSI	ENSPSIP00000008119	ENSPSIP00000000512	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Ubiquitin-like domain-containing protein.	0.563
BTRC	K7FGV8_PELSI	ENSPSIP00000008119	ENSPSIP00000007268	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.835
BTRC	PSMD14	ENSPSIP00000008119	ENSPSIP00000004574	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Proteasome 26S subunit, non-ATPase 14.	0.618
BTRC	RBX1	ENSPSIP00000008119	ENSPSIP00000005074	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Ring-box 1.	0.994
BTRC	RPS27A	ENSPSIP00000008119	ENSPSIP00000014184	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Ubiquitin-like domain-containing protein.	0.740
BTRC	SKP1	ENSPSIP00000008119	ENSPSIP00000005350	Beta-transducin repeat containing E3 ubiquitin protein ligase.	S-phase kinase associated protein 1; Belongs to the SKP1 family.	0.999
BTRC	UBA52	ENSPSIP00000008119	ENSPSIP00000012408	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.720
BTRC	UBC	ENSPSIP00000008119	ENSPSIP00000003340	Beta-transducin repeat containing E3 ubiquitin protein ligase.	Uncharacterized protein.	0.734
CSNK1A1	BTRC	ENSPSIP00000013702	ENSPSIP00000008119	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Beta-transducin repeat containing E3 ubiquitin protein ligase.	0.549
CSNK1A1	CUL1	ENSPSIP00000013702	ENSPSIP00000017614	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Cullin 1; Belongs to the cullin family.	0.694
CSNK1A1	GLI3	ENSPSIP00000013702	ENSPSIP00000020145	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	GLI family zinc finger 3.	0.665
CSNK1A1	GSK3B	ENSPSIP00000013702	ENSPSIP00000010018	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily.	0.864
CSNK1A1	K7FGV8_PELSI	ENSPSIP00000013702	ENSPSIP00000007268	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.797
CSNK1A1	PRKACA	ENSPSIP00000013702	ENSPSIP00000014927	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.925
CSNK1A1	PRKACB	ENSPSIP00000013702	ENSPSIP00000007634	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.925
CSNK1A1	PSMA1	ENSPSIP00000013702	ENSPSIP00000015611	Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.	Proteasome endopeptidase complex.	0.499