90 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB27A	RAB27A, member RAS oncogene family. (221 aa)
	RAB39A	RAB39A, member RAS oncogene family. (213 aa)
	MADD	MAP kinase activating death domain. (1641 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	YWHAE	Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon; Belongs to the 14-3-3 family. (233 aa)
	ALS2	Alsin Rho guanine nucleotide exchange factor ALS2. (1629 aa)
	RAB14	RAB14, member RAS oncogene family. (215 aa)
	DENND2C	DENN domain containing 2C. (933 aa)
	JPH1	Junctophilin 1. (586 aa)
	WDR54	WD repeat domain 54. (236 aa)
	RAB7B	RAB7B, member RAS oncogene family. (200 aa)
	RIN1	Ras and Rab interactor 1. (568 aa)
	RAB5B	RAB5B, member RAS oncogene family. (217 aa)
	TRAPPC12	Trafficking protein particle complex 12. (784 aa)
	SH3YL1	SH3 and SYLF domain containing 1. (341 aa)
	RAB9B	RAB9B, member RAS oncogene family. (201 aa)
	RAB9A	RAB9A, member RAS oncogene family. (201 aa)
	GAPVD1	GTPase activating protein and VPS9 domains 1. (1461 aa)
	RAB12	RAB12, member RAS oncogene family. (176 aa)
	GAREM1	GRB2 associated regulator of MAPK1 subtype 1. (887 aa)
	K7FCY5_PELSI	Uncharacterized protein. (161 aa)
	RAB3GAP1	RAB3 GTPase activating protein catalytic subunit 1. (967 aa)
	RAB3IP	Sec2p domain-containing protein. (461 aa)
	K7GDE6_PELSI	Uncharacterized protein. (145 aa)
	RAB6B	RAB6B, member RAS oncogene family. (141 aa)
	SBF2	SET binding factor 2. (1873 aa)
	DENND2B	Suppression of tumorigenicity 5. (1122 aa)
	RAB17	RAB17, member RAS oncogene family. (237 aa)
	RAB35	Uncharacterized protein. (193 aa)
	RAB10	RAB10, member RAS oncogene family. (137 aa)
	DENND6B	DENN domain containing 6B. (528 aa)
	RAB38	RAB38, member RAS oncogene family. (212 aa)
	RIC1	RIC1 homolog, RAB6A GEF complex partner 1. (1342 aa)
	ULK2	Unc-51 like autophagy activating kinase 2. (1015 aa)
	RAB5C	Uncharacterized protein. (216 aa)
	DENND5B	DENN domain containing 5B. (1196 aa)
	DENND2D	DENN domain containing 2D. (426 aa)
	RAB27B	RAB27B, member RAS oncogene family. (218 aa)
	DENND3	DENN domain containing 3. (1268 aa)
	RAB6A	RAB6A, member RAS oncogene family. (185 aa)
	CCZ1	Uncharacterized protein. (482 aa)
	DENND1B-2	Uncharacterized protein. (356 aa)
	JPH3	Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. (761 aa)
	RAB32	RAB32, member RAS oncogene family. (218 aa)
	RSPH1	Radial spoke head component 1. (230 aa)
	K7G4W9_PELSI	Uncharacterized protein. (890 aa)
	RIN2	Ras and Rab interactor 2. (891 aa)
	MORN1	MORN repeat containing 1. (365 aa)
	DENND1A	DENN domain containing 1A. (1052 aa)
	RAB5A	RAB5A, member RAS oncogene family. (215 aa)
	DENND5A	DENN domain containing 5A. (966 aa)
	RIN3	Ras and Rab interactor 3. (973 aa)
	RABGEF1	Uncharacterized protein. (578 aa)
	DENND1B	DENN domain containing 1B. (386 aa)
	RAB8B	RAB8B, member RAS oncogene family. (183 aa)
	LOC102463148	Uncharacterized protein. (178 aa)
	RAB3IL1	RAB3A interacting protein like 1. (434 aa)
	DENND6A	DENN domain containing 6A. (478 aa)
	K7FB03_PELSI	Uncharacterized protein. (184 aa)
	TRAPPC8	Trafficking protein particle complex 8. (1419 aa)
	AKT3	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
	K7FBX3_PELSI	Uncharacterized protein. (98 aa)
	RAB3GAP2	RAB3 GTPase activating non-catalytic protein subunit 2. (1397 aa)
	CHM	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (623 aa)
	DENND2A	DENN domain containing 2A. (1111 aa)
	AKT1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
	RAB8A	RAB8A, member RAS oncogene family. (180 aa)
	RAB1A	RAB1A, member RAS oncogene family. (205 aa)
	LOC102458629	Uncharacterized protein. (214 aa)
	K7G3G9_PELSI	Uncharacterized protein. (468 aa)
	GDI2	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)
	DENND1C	DENN domain containing 1C. (527 aa)
	JPH2	Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. (760 aa)
	ANKRD27	Ankyrin repeat domain 27. (1065 aa)
	DENND4A	DENN domain containing 4A. (1889 aa)
	DENND4C	DENN domain containing 4C. (661 aa)
	ULK1	Unc-51 like autophagy activating kinase 1. (1030 aa)
	HPS4	HPS4 biogenesis of lysosomal organelles complex 3 subunit 2. (702 aa)
	RAB31	RAB31, member RAS oncogene family. (195 aa)
	ANKMY1	Ankyrin repeat and MYND domain containing 1. (856 aa)
	MON1B	MON1 homolog B, secretory trafficking associated. (436 aa)
	VPS9D1	VPS9 domain containing 1. (577 aa)
	TRAPPC1	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (88 aa)
	RAB41	RAB41, member RAS oncogene family. (193 aa)
	RAB15	RAB15, member RAS oncogene family. (178 aa)
	ALS2CL	ALS2 C-terminal like. (736 aa)
	LCA5	Lebercilin LCA5. (679 aa)
	TRAPPC13	Trafficking protein particle complex 13. (474 aa)
	K7FUU4_PELSI	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (191 aa)
	TRAPPC11	Trafficking protein particle complex 11. (1133 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKT1	AKT3	ENSPSIP00000008474	ENSPSIP00000005472	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.900
AKT3	AKT1	ENSPSIP00000005472	ENSPSIP00000008474	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.900
ALS2	ALS2CL	ENSPSIP00000013025	ENSPSIP00000011185	Alsin Rho guanine nucleotide exchange factor ALS2.	ALS2 C-terminal like.	0.472
ALS2	ANKRD27	ENSPSIP00000013025	ENSPSIP00000013838	Alsin Rho guanine nucleotide exchange factor ALS2.	Ankyrin repeat domain 27.	0.576
ALS2	GAPVD1	ENSPSIP00000013025	ENSPSIP00000005680	Alsin Rho guanine nucleotide exchange factor ALS2.	GTPase activating protein and VPS9 domains 1.	0.720
ALS2	GDI2	ENSPSIP00000013025	ENSPSIP00000014149	Alsin Rho guanine nucleotide exchange factor ALS2.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.641
ALS2	RAB17	ENSPSIP00000013025	ENSPSIP00000019191	Alsin Rho guanine nucleotide exchange factor ALS2.	RAB17, member RAS oncogene family.	0.546
ALS2	RAB31	ENSPSIP00000013025	ENSPSIP00000010047	Alsin Rho guanine nucleotide exchange factor ALS2.	RAB31, member RAS oncogene family.	0.484
ALS2	RAB5A	ENSPSIP00000013025	ENSPSIP00000007889	Alsin Rho guanine nucleotide exchange factor ALS2.	RAB5A, member RAS oncogene family.	0.546
ALS2	RAB5B	ENSPSIP00000013025	ENSPSIP00000003195	Alsin Rho guanine nucleotide exchange factor ALS2.	RAB5B, member RAS oncogene family.	0.546
ALS2	RAB5C	ENSPSIP00000013025	ENSPSIP00000016824	Alsin Rho guanine nucleotide exchange factor ALS2.	Uncharacterized protein.	0.546
ALS2	RABGEF1	ENSPSIP00000013025	ENSPSIP00000007267	Alsin Rho guanine nucleotide exchange factor ALS2.	Uncharacterized protein.	0.971
ALS2	RIN1	ENSPSIP00000013025	ENSPSIP00000003217	Alsin Rho guanine nucleotide exchange factor ALS2.	Ras and Rab interactor 1.	0.566
ALS2	RIN2	ENSPSIP00000013025	ENSPSIP00000015300	Alsin Rho guanine nucleotide exchange factor ALS2.	Ras and Rab interactor 2.	0.491
ALS2	RIN3	ENSPSIP00000013025	ENSPSIP00000007417	Alsin Rho guanine nucleotide exchange factor ALS2.	Ras and Rab interactor 3.	0.566
ALS2CL	ALS2	ENSPSIP00000011185	ENSPSIP00000013025	ALS2 C-terminal like.	Alsin Rho guanine nucleotide exchange factor ALS2.	0.472
ALS2CL	GAPVD1	ENSPSIP00000011185	ENSPSIP00000005680	ALS2 C-terminal like.	GTPase activating protein and VPS9 domains 1.	0.540
ALS2CL	GDI2	ENSPSIP00000011185	ENSPSIP00000014149	ALS2 C-terminal like.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.415
ALS2CL	RABGEF1	ENSPSIP00000011185	ENSPSIP00000007267	ALS2 C-terminal like.	Uncharacterized protein.	0.549
ALS2CL	RIN1	ENSPSIP00000011185	ENSPSIP00000003217	ALS2 C-terminal like.	Ras and Rab interactor 1.	0.448