STRINGSTRING
LOC106732714 LOC106732714 PSMD1 PSMD1 K7F3C8_PELSI K7F3C8_PELSI SMARCE1 SMARCE1 PSMA8 PSMA8 CBX4 CBX4 CBX8 CBX8 CBX2 CBX2 PSMD6 PSMD6 SMARCC2 SMARCC2 UBC UBC BLK BLK PAX5 PAX5 PSMD11 PSMD11 PSMB6 PSMB6 PTPN11 PTPN11 K7F7E8_PELSI K7F7E8_PELSI LOC102449128 LOC102449128 KMT2E KMT2E PSMC3 PSMC3 TP73 TP73 ESR1 ESR1 PSMD14 PSMD14 SPI1 SPI1 SMARCD2 SMARCD2 CSNK2A2 CSNK2A2 PSMC5 PSMC5 EP300 EP300 K7FBN8_PELSI K7FBN8_PELSI PSMD8 PSMD8 LOC102447645 LOC102447645 PSMB7 PSMB7 SMARCA4 SMARCA4 PSMB4 PSMB4 DPY30 DPY30 H2AZ2 H2AZ2 PSMD5 PSMD5 ELF4 ELF4 ELF1 ELF1 SMARCA2 SMARCA2 PSMD12 PSMD12 K7FFP3_PELSI K7FFP3_PELSI ARID2 ARID2 CSNK2B CSNK2B LOC102460627 LOC102460627 PSMD13 PSMD13 ITCH ITCH KMT2A KMT2A PSMA4 PSMA4 LMO2 LMO2 LMO3 LMO3 K7FKZ4_PELSI K7FKZ4_PELSI CBFB CBFB CREBBP CREBBP SIN3B SIN3B K7FN52_PELSI K7FN52_PELSI PRMT8 PRMT8 SCMH1 SCMH1 PSMD10 PSMD10 ACTL6B ACTL6B PSMA6 PSMA6 H2AZ1 H2AZ1 K7EXN6_PELSI K7EXN6_PELSI K7FQ62_PELSI K7FQ62_PELSI K7FQH5_PELSI K7FQH5_PELSI ARID1B ARID1B PSMD7 PSMD7 PSMB3 PSMB3 CCND3 CCND3 CDK7 CDK7 CCND1 CCND1 TAL1 TAL1 ELF2 ELF2 SAMD11 SAMD11 PSMD3 PSMD3 AUTS2 AUTS2 PSMB2 PSMB2 GATA2 GATA2 UBA52 UBA52 PSME4 PSME4 CCND2 CCND2 LOC102455368 LOC102455368 PSMA5 PSMA5 PBRM1 PBRM1 SMARCC1 SMARCC1 WDR5B WDR5B ACTL6A ACTL6A MYB MYB K7FZH9_PELSI K7FZH9_PELSI RBBP5 RBBP5 PAX8 PAX8 SCML2 SCML2 TMEM62 TMEM62 SMARCB1 SMARCB1 CBX6 CBX6 RPS27A RPS27A RNF2 RNF2 CCNH CCNH PHC3 PHC3 PSMC6 PSMC6 ASH2L ASH2L PHC2 PHC2 PSMC2 PSMC2 GATA3 GATA3 PSMA1 PSMA1 LOC102443910 LOC102443910 PSMC1 PSMC1 MNAT1 MNAT1 PSMA3 PSMA3 SMARCD1 SMARCD1 PHC1 PHC1 HIPK2 HIPK2 LMO1 LMO1 PSMD9 PSMD9 LDB2 LDB2 PSMC4 PSMC4 K7GCM0_PELSI K7GCM0_PELSI PCGF5 PCGF5 PSMA7 PSMA7 K7GD77_PELSI K7GD77_PELSI PSMF1 PSMF1 ARID1A ARID1A SIN3A SIN3A KMT2C KMT2C CSNK2A1 CSNK2A1 PSMA2 PSMA2 PSMD4 PSMD4 LOC102454071 LOC102454071 LOC102445301 LOC102445301 LOC102454821 LOC102454821 LOC102455573 LOC102455573 LOC102455816 LOC102455816 LOC102444105 LOC102444105 ENSPSIP00000001420 ENSPSIP00000001420 LOC102446769 LOC102446769 LOC102448415 LOC102448415 LOC102448654 LOC102448654 ENSPSIP00000001542 ENSPSIP00000001542 LOC102450092 LOC102450092 LOC102450562 LOC102450562 LOC102450788 LOC102450788 LOC102451747 LOC102451747 LOC102451988 LOC102451988 SOCS4 SOCS4 K7F2N8_PELSI K7F2N8_PELSI LOC102452578 LOC102452578 LOC102453087 LOC102453087 K7EXK2_PELSI K7EXK2_PELSI
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106732714Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (94 aa)
PSMD126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (809 aa)
K7F3C8_PELSIProteasome subunit alpha type. (245 aa)
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (433 aa)
PSMA8Proteasome endopeptidase complex. (194 aa)
CBX4Chromobox 4. (456 aa)
CBX8Chromobox 8. (371 aa)
CBX2Chromobox 2. (504 aa)
PSMD6Proteasome 26S subunit, non-ATPase 6. (371 aa)
SMARCC2SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2. (1094 aa)
UBCUncharacterized protein. (355 aa)
BLKTyrosine-protein kinase. (462 aa)
PAX5Paired box 5. (387 aa)
PSMD11Proteasome 26S subunit, non-ATPase 11. (393 aa)
PSMB6Proteasome subunit beta 6. (228 aa)
PTPN11Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (591 aa)
K7F7E8_PELSIHistone H2B; Belongs to the histone H2B family. (134 aa)
LOC102449128Histone H2B; Belongs to the histone H2B family. (134 aa)
KMT2ELysine methyltransferase 2E. (1746 aa)
PSMC3Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (426 aa)
TP73Tumor protein p73; Participates in the apoptotic response to DNA damage. Isoforms containing the transactivation domain are pro-apoptotic, isoforms lacking the domain are anti-apoptotic and block the function of p53 and transactivating p73 isoforms. May be a tumor suppressor protein. (633 aa)
ESR1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (588 aa)
PSMD14Proteasome 26S subunit, non-ATPase 14. (310 aa)
SPI1Spi-1 proto-oncogene. (265 aa)
SMARCD2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (442 aa)
CSNK2A2Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily. (340 aa)
PSMC5Proteasome 26S subunit, ATPase 5. (228 aa)
EP300E1A binding protein p300. (2399 aa)
K7FBN8_PELSIUncharacterized protein. (1738 aa)
PSMD8Proteasome 26S subunit, non-ATPase 8. (244 aa)
LOC102447645Uncharacterized protein. (227 aa)
PSMB7Proteasome subunit beta. (277 aa)
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1613 aa)
PSMB4Proteasome subunit beta; Belongs to the peptidase T1B family. (230 aa)
DPY30Dpy-30 histone methyltransferase complex regulatory subunit. (99 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (128 aa)
PSMD5Proteasome 26S subunit, non-ATPase 5. (453 aa)
ELF4Elf-1_N domain-containing protein. (161 aa)
ELF1E74 like ETS transcription factor 1. (627 aa)
SMARCA2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1573 aa)
PSMD12Proteasome 26S subunit, non-ATPase 12. (420 aa)
K7FFP3_PELSISWIB domain-containing protein. (286 aa)
ARID2AT-rich interaction domain 2. (1824 aa)
CSNK2BCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (216 aa)
LOC102460627N-SET domain-containing protein. (951 aa)
PSMD13Proteasome 26S subunit, non-ATPase 13. (365 aa)
ITCHE3 ubiquitin-protein ligase. (845 aa)
KMT2AHistone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (3842 aa)
PSMA4Proteasome subunit alpha type. (262 aa)
LMO2LIM domain only 2. (201 aa)
LMO3LIM domain only 3. (156 aa)
K7FKZ4_PELSIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (386 aa)
CBFBCore-binding factor subunit beta. (132 aa)
CREBBPCREB binding protein. (2063 aa)
SIN3BSIN3 transcription regulator family member B. (1090 aa)
K7FN52_PELSIPax2_C domain-containing protein. (286 aa)
PRMT8Protein arginine methyltransferase 8; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (339 aa)
SCMH1Scm polycomb group protein homolog 1. (512 aa)
PSMD10Proteasome 26S subunit, non-ATPase 10. (190 aa)
ACTL6BActin like 6B; Belongs to the actin family. (429 aa)
PSMA6Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (246 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
K7EXN6_PELSIHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
K7FQ62_PELSIUncharacterized protein. (809 aa)
K7FQH5_PELSIUncharacterized protein. (286 aa)
ARID1BARID domain-containing protein. (1325 aa)
PSMD7Proteasome 26S subunit, non-ATPase 7. (323 aa)
PSMB3Proteasome subunit beta. (204 aa)
CCND3Cyclin D3; Belongs to the cyclin family. (297 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
CCND1Cyclin D1; Belongs to the cyclin family. (292 aa)
TAL1TAL bHLH transcription factor 1, erythroid differentiation factor. (174 aa)
ELF2E74 like ETS transcription factor 2. (593 aa)
SAMD11Sterile alpha motif domain containing 11. (650 aa)
PSMD3Proteasome 26S subunit, non-ATPase 3. (461 aa)
AUTS2Activator of transcription and developmental regulator AUTS2. (1023 aa)
PSMB2Proteasome subunit beta. (171 aa)
GATA2GATA binding protein 2. (479 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
PSME4Proteasome activator subunit 4. (1837 aa)
CCND2Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (291 aa)
LOC102455368Uncharacterized protein. (360 aa)
PSMA5Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (237 aa)
PBRM1Polybromo 1. (1707 aa)
SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1. (608 aa)
WDR5BWD repeat domain 5B. (334 aa)
ACTL6AActin like 6A; Belongs to the actin family. (441 aa)
MYBMYB proto-oncogene, transcription factor. (759 aa)
K7FZH9_PELSIUncharacterized protein. (310 aa)
RBBP5RB binding protein 5, histone lysine methyltransferase complex subunit. (535 aa)
PAX8Paired box 8. (321 aa)
SCML2Scm polycomb group protein like 2. (727 aa)
TMEM62Transmembrane protein 62. (513 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (371 aa)
CBX6Chromobox 6. (413 aa)
RPS27AUbiquitin-like domain-containing protein. (140 aa)
RNF2Ring finger protein 2. (350 aa)
CCNHCyclin H; Belongs to the cyclin family. (363 aa)
PHC3Polyhomeotic homolog 3. (994 aa)
PSMC6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (288 aa)
ASH2LASH2 like, histone lysine methyltransferase complex subunit. (590 aa)
PHC2Polyhomeotic homolog 2. (846 aa)
PSMC2Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (437 aa)
GATA3GATA binding protein 3. (425 aa)
PSMA1Proteasome endopeptidase complex. (236 aa)
LOC102443910Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
PSMC1Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family. (439 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
PSMA3Proteasome subunit alpha type. (255 aa)
SMARCD1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (400 aa)
PHC1Polyhomeotic homolog 1. (996 aa)
HIPK2Homeodomain interacting protein kinase 2. (1205 aa)
LMO1LIM domain only 1. (157 aa)
PSMD9PDZ domain-containing protein. (166 aa)
LDB2LIM domain binding 2. (373 aa)
PSMC4Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (406 aa)
K7GCM0_PELSIUncharacterized protein. (1867 aa)
PCGF5Polycomb group ring finger 5. (256 aa)
PSMA7Proteasome endopeptidase complex. (220 aa)
K7GD77_PELSIUncharacterized protein. (148 aa)
PSMF1PI31_Prot_C domain-containing protein. (174 aa)
ARID1AAT-rich interaction domain 1A. (1899 aa)
SIN3ASIN3 transcription regulator family member A. (1274 aa)
KMT2CLysine methyltransferase 2C. (1873 aa)
CSNK2A1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (391 aa)
PSMA2Proteasome endopeptidase complex. (156 aa)
PSMD4Proteasome 26S subunit, non-ATPase 4. (378 aa)
LOC102454071Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (109 aa)
LOC102445301Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC102454821Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102455573Histone H2B 8. (126 aa)
LOC102455816Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC102444105Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSPSIP00000001420annotation not available (103 aa)
LOC102446769Histone H2B 8. (126 aa)
LOC102448415Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (107 aa)
LOC102448654Histone H4. (107 aa)
ENSPSIP00000001542annotation not available (103 aa)
LOC102450092Histone H4. (103 aa)
LOC102450562Histone H4. (103 aa)
LOC102450788Histone H4. (103 aa)
LOC102451747Histone H2B 1/2/3/4/6. (126 aa)
LOC102451988Histone H2B; Belongs to the histone H2B family. (126 aa)
SOCS4Suppressor of cytokine signaling 4. (436 aa)
K7F2N8_PELSIRRM domain-containing protein. (489 aa)
LOC102452578Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102453087Histone H2B 8. (126 aa)
K7EXK2_PELSIUbiquitin-like domain-containing protein. (32 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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