STRINGSTRING
K7EXK2_PELSI K7EXK2_PELSI DYNC1I1 DYNC1I1 LAMTOR5 LAMTOR5 ARL13B ARL13B K7GJB6_PELSI K7GJB6_PELSI DYNC1LI2 DYNC1LI2 RPTOR RPTOR CSNK2A1 CSNK2A1 CHMP7 CHMP7 CHMP6 CHMP6 PRKAB1 PRKAB1 ATG12 ATG12 MAP1LC3B MAP1LC3B CFTR CFTR C17orf75 C17orf75 LOC102450820 LOC102450820 MTERF3 MTERF3 ATG10 ATG10 LAMTOR4 LAMTOR4 SLC38A9 SLC38A9 KIAA1671 KIAA1671 CRYBB3 CRYBB3 ULK2 ULK2 CHMP2A CHMP2A K7GAK5_PELSI K7GAK5_PELSI RB1CC1 RB1CC1 LOC102450218 LOC102450218 TUBA8 TUBA8 DYNC1I2 DYNC1I2 LOC102457342 LOC102457342 TUBB4A TUBB4A ATG16L2 ATG16L2 DYNLL1 DYNLL1 GFAP GFAP PRKAA1 PRKAA1 FUNDC1 FUNDC1 PARK7 PARK7 ATG4C ATG4C MFN1 MFN1 TUBB6 TUBB6 TSC2 TSC2 PRKAB2 PRKAB2 RPS27A RPS27A MAP1LC3C MAP1LC3C RRAGB RRAGB ATG7 ATG7 WDR45B WDR45B PIK3C3 PIK3C3 CETN3 CETN3 UVRAG UVRAG LOC102450295 LOC102450295 PRKAG2 PRKAG2 KXD1 KXD1 UBA52 UBA52 MAP1LC3A MAP1LC3A ATG4B ATG4B TOMM20 TOMM20 TXNDC11 TXNDC11 ATG14 ATG14 K7FVE5_PELSI K7FVE5_PELSI GABARAPL2 GABARAPL2 MFN2 MFN2 WIPI2 WIPI2 TSC1 TSC1 TUBB2A TUBB2A RHEB RHEB LOC102454956 LOC102454956 RRAGD RRAGD WIPI1 WIPI1 CRYGN CRYGN SQSTM1 SQSTM1 PEX5L PEX5L PLIN2 PLIN2 DYNLL2 DYNLL2 LAMTOR3 LAMTOR3 ULK1 ULK1 MLST8 MLST8 ATG4A ATG4A GABARAPL1 GABARAPL1 TOMM40 TOMM40 K7FKZ4_PELSI K7FKZ4_PELSI K7FIX1_PELSI K7FIX1_PELSI MTOR MTOR ATG13 ATG13 DYNC1H1 DYNC1H1 TUBB3 TUBB3 CHMP4B CHMP4B CSNK2B CSNK2B PEX5 PEX5 FNDC3B FNDC3B K7FGG7_PELSI K7FGG7_PELSI AMBRA1 AMBRA1 USP30 USP30 ATM ATM TUBA4A TUBA4A K7FEZ1_PELSI K7FEZ1_PELSI IFT88 IFT88 K7FDM1_PELSI K7FDM1_PELSI PRKN PRKN TUBB1 TUBB1 NBR1 NBR1 PINK1 PINK1 VDAC1 VDAC1 UBE2N UBE2N LOC102460613 LOC102460613 FUNDC2 FUNDC2 ILRUN ILRUN K7FAW1_PELSI K7FAW1_PELSI TOMM40L TOMM40L DYNC1LI1 DYNC1LI1 BECN1 BECN1 CSNK2A2 CSNK2A2 TOMM22 TOMM22 RRAGC RRAGC TUBE1 TUBE1 TOMM70 TOMM70 PRKAA2 PRKAA2 LOC102446337 LOC102446337 MTMR3 MTMR3 UBC UBC TUBA1C TUBA1C RHEBL1 RHEBL1 ATG5 ATG5 ATG101 ATG101 PIK3R4 PIK3R4 CHMP4C CHMP4C LAMTOR1 LAMTOR1 PGAM5 PGAM5 ATG3 ATG3 FNDC3A FNDC3A ATG16L1 ATG16L1 CHMP2B CHMP2B K7F0I3_PELSI K7F0I3_PELSI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
K7EXK2_PELSIUbiquitin-like domain-containing protein. (32 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (628 aa)
LAMTOR5Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5. (79 aa)
ARL13BADP ribosylation factor like GTPase 13B. (409 aa)
K7GJB6_PELSIUncharacterized protein. (301 aa)
DYNC1LI2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (470 aa)
RPTORRegulatory associated protein of MTOR complex 1. (1245 aa)
CSNK2A1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (391 aa)
CHMP7Charged multivesicular body protein 7. (297 aa)
CHMP6Charged multivesicular body protein 6. (179 aa)
PRKAB1Protein kinase AMP-activated non-catalytic subunit beta 1. (263 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (143 aa)
MAP1LC3BUncharacterized protein. (112 aa)
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1015 aa)
C17orf75Chromosome 17 open reading frame 75. (387 aa)
LOC102450820Uncharacterized protein. (220 aa)
MTERF3Mitochondrial transcription termination factor 3. (284 aa)
ATG10Autophagy related 10. (257 aa)
LAMTOR4Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4. (98 aa)
SLC38A9Solute carrier family 38 member 9. (559 aa)
KIAA1671KIAA1671. (2011 aa)
CRYBB3Crystallin beta B3; Belongs to the beta/gamma-crystallin family. (134 aa)
ULK2Unc-51 like autophagy activating kinase 2. (1015 aa)
CHMP2ACharged multivesicular body protein 2A. (238 aa)
K7GAK5_PELSITubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (413 aa)
RB1CC1RB1 inducible coiled-coil 1. (1591 aa)
LOC102450218Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (273 aa)
TUBA8Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
DYNC1I2Dynein cytoplasmic 1 intermediate chain 2. (657 aa)
LOC102457342Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (455 aa)
TUBB4ATubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (406 aa)
ATG16L2Autophagy related 16 like 2. (449 aa)
DYNLL1Dynein light chain. (89 aa)
GFAPGlial fibrillary acidic protein; Belongs to the intermediate filament family. (413 aa)
PRKAA1Non-specific serine/threonine protein kinase. (560 aa)
FUNDC1FUN14 domain containing 1. (100 aa)
PARK7Parkinsonism associated deglycase. (189 aa)
ATG4CCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (459 aa)
MFN1Mitofusin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (752 aa)
TUBB6Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
TSC2TSC complex subunit 2. (1816 aa)
PRKAB2Protein kinase AMP-activated non-catalytic subunit beta 2. (274 aa)
RPS27AUbiquitin-like domain-containing protein. (140 aa)
MAP1LC3CMicrotubule associated protein 1 light chain 3 gamma. (143 aa)
RRAGBRas related GTP binding B. (313 aa)
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (661 aa)
WDR45BWD repeat domain 45B. (335 aa)
PIK3C3Phosphatidylinositol 3-kinase catalytic subunit type 3. (864 aa)
CETN3Centrin 3. (167 aa)
UVRAGUV radiation resistance associated. (659 aa)
LOC102450295Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (414 aa)
PRKAG2Protein kinase AMP-activated non-catalytic subunit gamma 2. (564 aa)
KXD1KxDL motif containing 1. (176 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
MAP1LC3AMicrotubule associated protein 1 light chain 3 alpha. (121 aa)
ATG4BCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (392 aa)
TOMM20Translocase of outer mitochondrial membrane 20. (146 aa)
TXNDC11Thioredoxin domain containing 11. (900 aa)
ATG14Autophagy related 14. (393 aa)
K7FVE5_PELSIUncharacterized protein. (49 aa)
GABARAPL2GABA type A receptor associated protein like 2. (106 aa)
MFN2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
WIPI2WD repeat domain, phosphoinositide interacting 2. (414 aa)
TSC1TSC complex subunit 1. (1168 aa)
TUBB2ATubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
RHEBRas homolog, mTORC1 binding. (184 aa)
LOC102454956Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (427 aa)
RRAGDRas related GTP binding D. (393 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (422 aa)
CRYGNCrystallin gamma N; Belongs to the beta/gamma-crystallin family. (183 aa)
SQSTM1Sequestosome 1. (437 aa)
PEX5LPeroxisomal biogenesis factor 5 like. (601 aa)
PLIN2Perilipin; Belongs to the perilipin family. (465 aa)
DYNLL2Dynein light chain. (91 aa)
LAMTOR3Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3. (124 aa)
ULK1Unc-51 like autophagy activating kinase 1. (1030 aa)
MLST8MTOR associated protein, LST8 homolog. (271 aa)
ATG4ACysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (387 aa)
GABARAPL1GABA type A receptor associated protein like 1. (117 aa)
TOMM40Translocase of outer mitochondrial membrane 40. (387 aa)
K7FKZ4_PELSIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (386 aa)
K7FIX1_PELSIGSAP-16 domain-containing protein. (151 aa)
MTORSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2522 aa)
ATG13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (555 aa)
DYNC1H1Dynein cytoplasmic 1 heavy chain 1. (4659 aa)
TUBB3Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (459 aa)
CHMP4BCharged multivesicular body protein 4B. (162 aa)
CSNK2BCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (216 aa)
PEX5Peroxisomal biogenesis factor 5. (559 aa)
FNDC3BFibronectin type III domain containing 3B. (1211 aa)
K7FGG7_PELSIUncharacterized protein. (738 aa)
AMBRA1Autophagy and beclin 1 regulator 1. (1301 aa)
USP30Ubiquitin carboxyl-terminal hydrolase. (489 aa)
ATMNon-specific serine/threonine protein kinase. (3061 aa)
TUBA4ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (455 aa)
K7FEZ1_PELSIUncharacterized protein. (270 aa)
IFT88Intraflagellar transport 88. (785 aa)
K7FDM1_PELSIUncharacterized protein. (254 aa)
PRKNRBR-type E3 ubiquitin transferase. (119 aa)
TUBB1Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
NBR1NBR1 autophagy cargo receptor. (995 aa)
PINK1PTEN induced kinase 1. (364 aa)
VDAC1Voltage dependent anion channel 1. (283 aa)
UBE2NUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
LOC102460613Uncharacterized protein. (192 aa)
FUNDC2FUN14 domain containing 2. (152 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (217 aa)
K7FAW1_PELSIUncharacterized protein. (89 aa)
TOMM40LTranslocase of outer mitochondrial membrane 40 like. (305 aa)
DYNC1LI1Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (454 aa)
BECN1Uncharacterized protein. (407 aa)
CSNK2A2Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily. (340 aa)
TOMM22Translocase of outer mitochondrial membrane 22. (144 aa)
RRAGCRas related GTP binding C. (338 aa)
TUBE1Tubulin epsilon 1; Belongs to the tubulin family. (400 aa)
TOMM70Translocase of outer mitochondrial membrane 70. (501 aa)
PRKAA2Non-specific serine/threonine protein kinase. (520 aa)
LOC102446337Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (442 aa)
MTMR3Myotubularin related protein 3. (1188 aa)
UBCUncharacterized protein. (355 aa)
TUBA1CTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
RHEBL1RHEB like 1. (139 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (276 aa)
ATG101Autophagy related 101. (230 aa)
PIK3R4Phosphoinositide-3-kinase regulatory subunit 4. (1359 aa)
CHMP4CCharged multivesicular body protein 4C. (172 aa)
LAMTOR1Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. (163 aa)
PGAM5PGAM family member 5, mitochondrial serine/threonine protein phosphatase. (226 aa)
ATG3Autophagy-related protein 3. (289 aa)
FNDC3AFibronectin type III domain containing 3A. (1142 aa)
ATG16L1Autophagy related 16 like 1. (607 aa)
CHMP2BCharged multivesicular body protein 2B. (214 aa)
K7F0I3_PELSIUncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (307 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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