STRINGSTRING
TUBA4A TUBA4A KXD1 KXD1 LOC102450295 LOC102450295 CETN3 CETN3 RPS27A RPS27A TUBB6 TUBB6 PARK7 PARK7 DYNLL1 DYNLL1 TUBB4A TUBB4A LOC102457342 LOC102457342 DYNC1I2 DYNC1I2 TUBA8 TUBA8 K7GAK5_PELSI K7GAK5_PELSI CFTR CFTR DYNC1LI2 DYNC1LI2 ARL13B ARL13B DYNC1I1 DYNC1I1 K7F0I3_PELSI K7F0I3_PELSI K7EXK2_PELSI K7EXK2_PELSI TUBA1C TUBA1C UBC UBC LOC102446337 LOC102446337 TUBE1 TUBE1 DYNC1LI1 DYNC1LI1 UBE2N UBE2N TUBB1 TUBB1 PRKN PRKN K7FDM1_PELSI K7FDM1_PELSI IFT88 IFT88 TUBB3 TUBB3 DYNC1H1 DYNC1H1 DYNLL2 DYNLL2 LOC102454956 LOC102454956 TUBB2A TUBB2A UBA52 UBA52
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TUBA4ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (455 aa)
KXD1KxDL motif containing 1. (176 aa)
LOC102450295Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (414 aa)
CETN3Centrin 3. (167 aa)
RPS27AUbiquitin-like domain-containing protein. (140 aa)
TUBB6Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
PARK7Parkinsonism associated deglycase. (189 aa)
DYNLL1Dynein light chain. (89 aa)
TUBB4ATubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (406 aa)
LOC102457342Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (455 aa)
DYNC1I2Dynein cytoplasmic 1 intermediate chain 2. (657 aa)
TUBA8Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
K7GAK5_PELSITubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (413 aa)
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1015 aa)
DYNC1LI2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (470 aa)
ARL13BADP ribosylation factor like GTPase 13B. (409 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (628 aa)
K7F0I3_PELSIUncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (307 aa)
K7EXK2_PELSIUbiquitin-like domain-containing protein. (32 aa)
TUBA1CTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
UBCUncharacterized protein. (355 aa)
LOC102446337Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (442 aa)
TUBE1Tubulin epsilon 1; Belongs to the tubulin family. (400 aa)
DYNC1LI1Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (454 aa)
UBE2NUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
TUBB1Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
PRKNRBR-type E3 ubiquitin transferase. (119 aa)
K7FDM1_PELSIUncharacterized protein. (254 aa)
IFT88Intraflagellar transport 88. (785 aa)
TUBB3Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (459 aa)
DYNC1H1Dynein cytoplasmic 1 heavy chain 1. (4659 aa)
DYNLL2Dynein light chain. (91 aa)
LOC102454956Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (427 aa)
TUBB2ATubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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