13 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX5L	Peroxisomal biogenesis factor 5 like. (601 aa)
	ILRUN	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (217 aa)
	USP30	Ubiquitin carboxyl-terminal hydrolase. (489 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (140 aa)
	KXD1	KxDL motif containing 1. (176 aa)
	UBA52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	SQSTM1	Sequestosome 1. (437 aa)
	K7FIX1_PELSI	GSAP-16 domain-containing protein. (151 aa)
	PEX5	Peroxisomal biogenesis factor 5. (559 aa)
	NBR1	NBR1 autophagy cargo receptor. (995 aa)
	ATM	Non-specific serine/threonine protein kinase. (3061 aa)
	K7EXK2_PELSI	Ubiquitin-like domain-containing protein. (32 aa)
	UBC	Uncharacterized protein. (355 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATM	K7FIX1_PELSI	ENSPSIP00000006822	ENSPSIP00000007981	Non-specific serine/threonine protein kinase.	GSAP-16 domain-containing protein.	0.563
ATM	NBR1	ENSPSIP00000006822	ENSPSIP00000005708	Non-specific serine/threonine protein kinase.	NBR1 autophagy cargo receptor.	0.952
ATM	PEX5	ENSPSIP00000006822	ENSPSIP00000007453	Non-specific serine/threonine protein kinase.	Peroxisomal biogenesis factor 5.	0.713
ATM	PEX5L	ENSPSIP00000006822	ENSPSIP00000010654	Non-specific serine/threonine protein kinase.	Peroxisomal biogenesis factor 5 like.	0.667
ATM	RPS27A	ENSPSIP00000006822	ENSPSIP00000014184	Non-specific serine/threonine protein kinase.	Ubiquitin-like domain-containing protein.	0.600
ATM	SQSTM1	ENSPSIP00000006822	ENSPSIP00000010714	Non-specific serine/threonine protein kinase.	Sequestosome 1.	0.621
ATM	UBC	ENSPSIP00000006822	ENSPSIP00000003340	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.636
ILRUN	K7EXK2_PELSI	ENSPSIP00000005219	ENSPSIP00000000512	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	Ubiquitin-like domain-containing protein.	0.458
ILRUN	K7FIX1_PELSI	ENSPSIP00000005219	ENSPSIP00000007981	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	GSAP-16 domain-containing protein.	0.528
ILRUN	NBR1	ENSPSIP00000005219	ENSPSIP00000005708	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	NBR1 autophagy cargo receptor.	0.528
ILRUN	PEX5	ENSPSIP00000005219	ENSPSIP00000007453	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	Peroxisomal biogenesis factor 5.	0.597
ILRUN	PEX5L	ENSPSIP00000005219	ENSPSIP00000010654	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	Peroxisomal biogenesis factor 5 like.	0.597
ILRUN	RPS27A	ENSPSIP00000005219	ENSPSIP00000014184	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	Ubiquitin-like domain-containing protein.	0.619
ILRUN	SQSTM1	ENSPSIP00000005219	ENSPSIP00000010714	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	Sequestosome 1.	0.528
ILRUN	UBA52	ENSPSIP00000005219	ENSPSIP00000012408	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.458
K7EXK2_PELSI	ILRUN	ENSPSIP00000000512	ENSPSIP00000005219	Ubiquitin-like domain-containing protein.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.458
K7EXK2_PELSI	K7FIX1_PELSI	ENSPSIP00000000512	ENSPSIP00000007981	Ubiquitin-like domain-containing protein.	GSAP-16 domain-containing protein.	0.573
K7EXK2_PELSI	NBR1	ENSPSIP00000000512	ENSPSIP00000005708	Ubiquitin-like domain-containing protein.	NBR1 autophagy cargo receptor.	0.936
K7EXK2_PELSI	PEX5	ENSPSIP00000000512	ENSPSIP00000007453	Ubiquitin-like domain-containing protein.	Peroxisomal biogenesis factor 5.	0.435
K7EXK2_PELSI	PEX5L	ENSPSIP00000000512	ENSPSIP00000010654	Ubiquitin-like domain-containing protein.	Peroxisomal biogenesis factor 5 like.	0.435