24 items (Pelodiscus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARNTL2	Aryl hydrocarbon receptor nuclear translocator like 2. (529 aa)
	PER2	Period circadian regulator 2. (1328 aa)
	SIM1	SIM bHLH transcription factor 1. (767 aa)
	KCNH3	Potassium voltage-gated channel subfamily H member 3. (536 aa)
	CLOCK	Clock circadian regulator. (850 aa)
	KCNH5	Potassium voltage-gated channel subfamily H member 5. (996 aa)
	EPAS1	Endothelial PAS domain protein 1. (872 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator-like 2. (633 aa)
	SIM2	SIM bHLH transcription factor 2. (618 aa)
	KCNH4	Potassium voltage-gated channel subfamily H member 4. (482 aa)
	K7GDD4_PELSI	Uncharacterized protein. (848 aa)
	NPAS3	Neuronal PAS domain protein 3. (721 aa)
	KCNH8	Potassium voltage-gated channel subfamily H member 8. (1086 aa)
	KCNH6	Potassium voltage-gated channel subfamily H member 6. (766 aa)
	NCOA2	Nuclear receptor coactivator. (1463 aa)
	PDE8A	Phosphodiesterase. (855 aa)
	NPAS2	Neuronal PAS domain protein 2. (544 aa)
	ARNT	Aryl hydrocarbon receptor nuclear translocator. (793 aa)
	CEP250	Uncharacterized protein. (523 aa)
	AHR	Uncharacterized protein. (831 aa)
	HIF1A	Hypoxia inducible factor 1 subunit alpha. (811 aa)
	ARNT2	Aryl hydrocarbon receptor nuclear translocator 2. (725 aa)
	KCNH1	Uncharacterized protein. (957 aa)
	KREMEN2	Kringle containing transmembrane protein 2. (385 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHR	ARNT	ENSPSIP00000011268	ENSPSIP00000009433	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.893
AHR	ARNT2	ENSPSIP00000011268	ENSPSIP00000011844	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.928
AHR	ARNTL	ENSPSIP00000011268	ENSPSIP00000014834	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator-like 2.	0.563
AHR	ARNTL2	ENSPSIP00000011268	ENSPSIP00000010491	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator like 2.	0.563
AHR	CLOCK	ENSPSIP00000011268	ENSPSIP00000012909	Uncharacterized protein.	Clock circadian regulator.	0.563
AHR	K7GDD4_PELSI	ENSPSIP00000011268	ENSPSIP00000018295	Uncharacterized protein.	Uncharacterized protein.	0.563
AHR	NCOA2	ENSPSIP00000011268	ENSPSIP00000020268	Uncharacterized protein.	Nuclear receptor coactivator.	0.563
AHR	NPAS2	ENSPSIP00000011268	ENSPSIP00000008045	Uncharacterized protein.	Neuronal PAS domain protein 2.	0.563
ARNT	AHR	ENSPSIP00000009433	ENSPSIP00000011268	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.893
ARNT	EPAS1	ENSPSIP00000009433	ENSPSIP00000014214	Aryl hydrocarbon receptor nuclear translocator.	Endothelial PAS domain protein 1.	0.899
ARNT	HIF1A	ENSPSIP00000009433	ENSPSIP00000011664	Aryl hydrocarbon receptor nuclear translocator.	Hypoxia inducible factor 1 subunit alpha.	0.880
ARNT	NPAS3	ENSPSIP00000009433	ENSPSIP00000019222	Aryl hydrocarbon receptor nuclear translocator.	Neuronal PAS domain protein 3.	0.783
ARNT	PER2	ENSPSIP00000009433	ENSPSIP00000002179	Aryl hydrocarbon receptor nuclear translocator.	Period circadian regulator 2.	0.472
ARNT	SIM1	ENSPSIP00000009433	ENSPSIP00000002638	Aryl hydrocarbon receptor nuclear translocator.	SIM bHLH transcription factor 1.	0.719
ARNT	SIM2	ENSPSIP00000009433	ENSPSIP00000015638	Aryl hydrocarbon receptor nuclear translocator.	SIM bHLH transcription factor 2.	0.719
ARNT2	AHR	ENSPSIP00000011844	ENSPSIP00000011268	Aryl hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.928
ARNT2	EPAS1	ENSPSIP00000011844	ENSPSIP00000014214	Aryl hydrocarbon receptor nuclear translocator 2.	Endothelial PAS domain protein 1.	0.899
ARNT2	HIF1A	ENSPSIP00000011844	ENSPSIP00000011664	Aryl hydrocarbon receptor nuclear translocator 2.	Hypoxia inducible factor 1 subunit alpha.	0.880
ARNT2	NPAS3	ENSPSIP00000011844	ENSPSIP00000019222	Aryl hydrocarbon receptor nuclear translocator 2.	Neuronal PAS domain protein 3.	0.783
ARNT2	PER2	ENSPSIP00000011844	ENSPSIP00000002179	Aryl hydrocarbon receptor nuclear translocator 2.	Period circadian regulator 2.	0.472