(13 nodes) Glycosphingolipid biosynthesis - ganglio series network (Pelodiscus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ST8SIA1	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family. (262 aa)
	GLB1	Beta-galactosidase. (656 aa)
	ST3GAL1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1; Belongs to the glycosyltransferase 29 family. (343 aa)
	ST6GALNAC3	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3; Belongs to the glycosyltransferase 29 family. (258 aa)
	ST6GALNAC4	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4; Belongs to the glycosyltransferase 29 family. (264 aa)
	ST6GALNAC6	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (328 aa)
	ST8SIA5	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5; Belongs to the glycosyltransferase 29 family. (412 aa)
	SLC33A1	Uncharacterized protein. (548 aa)
	ST3GAL5	ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family. (370 aa)
	ST6GALNAC5	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; Belongs to the glycosyltransferase 29 family. (246 aa)
	HEXA	Uncharacterized protein. (446 aa)
	HEXB	Beta-hexosaminidase. (512 aa)
	LOC102448658	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (282 aa)

Your Current Organism:

Pelodiscus sinensis

NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLB1	HEXA	ENSPSIP00000004192	ENSPSIP00000013821	Beta-galactosidase.	Uncharacterized protein.	0.953
GLB1	HEXB	ENSPSIP00000004192	ENSPSIP00000014996	Beta-galactosidase.	Beta-hexosaminidase.	0.953
GLB1	LOC102448658	ENSPSIP00000004192	ENSPSIP00000019022	Beta-galactosidase.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.911
GLB1	ST3GAL1	ENSPSIP00000004192	ENSPSIP00000004894	Beta-galactosidase.	ST3 beta-galactoside alpha-2,3-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.913
GLB1	ST3GAL5	ENSPSIP00000004192	ENSPSIP00000010517	Beta-galactosidase.	ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.	0.846
HEXA	GLB1	ENSPSIP00000013821	ENSPSIP00000004192	Uncharacterized protein.	Beta-galactosidase.	0.953
HEXA	HEXB	ENSPSIP00000013821	ENSPSIP00000014996	Uncharacterized protein.	Beta-hexosaminidase.	0.995
HEXA	ST3GAL5	ENSPSIP00000013821	ENSPSIP00000010517	Uncharacterized protein.	ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.	0.909
HEXA	ST8SIA1	ENSPSIP00000013821	ENSPSIP00000002748	Uncharacterized protein.	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.909
HEXB	GLB1	ENSPSIP00000014996	ENSPSIP00000004192	Beta-hexosaminidase.	Beta-galactosidase.	0.953
HEXB	HEXA	ENSPSIP00000014996	ENSPSIP00000013821	Beta-hexosaminidase.	Uncharacterized protein.	0.995
HEXB	ST3GAL5	ENSPSIP00000014996	ENSPSIP00000010517	Beta-hexosaminidase.	ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.	0.913
HEXB	ST8SIA1	ENSPSIP00000014996	ENSPSIP00000002748	Beta-hexosaminidase.	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.913
LOC102448658	GLB1	ENSPSIP00000019022	ENSPSIP00000004192	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Beta-galactosidase.	0.911
LOC102448658	ST3GAL1	ENSPSIP00000019022	ENSPSIP00000004894	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	ST3 beta-galactoside alpha-2,3-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.902
LOC102448658	ST6GALNAC3	ENSPSIP00000019022	ENSPSIP00000007587	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3; Belongs to the glycosyltransferase 29 family.	0.913
LOC102448658	ST6GALNAC4	ENSPSIP00000019022	ENSPSIP00000008550	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.	0.906
LOC102448658	ST6GALNAC5	ENSPSIP00000019022	ENSPSIP00000011995	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.	0.927
LOC102448658	ST6GALNAC6	ENSPSIP00000019022	ENSPSIP00000008731	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.917
LOC102448658	ST8SIA1	ENSPSIP00000019022	ENSPSIP00000002748	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.912