(7 nodes) FAD-binding domain, PCMH-type network (Spirosoma radiotolerans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKD55489.1	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
	AKD57079.1	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	AKD58777.1	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (998 aa)
	murB	UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (341 aa)
	AKD58242.1	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (987 aa)
	AKD55741.1	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	AKD57033.1	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)

Your Current Organism:

Spirosoma radiotolerans

NCBI taxonomy Id: 1379870
Other names: JCM 19447, KCTC 32455, S. radiotolerans, Spirosoma radiotolerans Lee et al. 2017, Spirosoma sp. DG5A, strain DG5A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKD55489.1	AKD55741.1	SD10_11825	SD10_13355	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AKD55489.1	AKD57033.1	SD10_11825	SD10_21185	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AKD55741.1	AKD55489.1	SD10_13355	SD10_11825	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AKD55741.1	AKD57033.1	SD10_13355	SD10_21185	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AKD57033.1	AKD55489.1	SD10_21185	SD10_11825	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AKD57033.1	AKD55741.1	SD10_21185	SD10_13355	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AKD58242.1	AKD58777.1	SD10_28460	SD10_24855	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
AKD58777.1	AKD58242.1	SD10_24855	SD10_28460	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460